#109 OS X fails 5/10 tests

[Hanspeter Niederstrasser]

On OS X, 5 tests fail for 1.14.8 (none failed for 1.13.7 which is the last version I tried to build):

FAIL: srf_info.test
FAIL: srf_index.test
PASS: srf_filter.test
PASS: srf2fastq.test
PASS: srf2fasta.test
PASS: cram_io.test
PASS: java.test
FAIL: scram_v3.test
FAIL: scram_mt.test
FAIL: scram.test

Attached is test-suite.log.

[Hanspeter Niederstrasser]

New detail: if I run make -j1 check, then all the tests pass. So it seems to that make check is not thread safe, rather tha there being some problem with the actual tests..

[James Bonfield]

I can verify this locally. The test framework is auto-generated by Automake, so I need to investigate how to add dependencies, but it should be easy enough to fix.

Thanks for the bug report.

[James Bonfield]

Fixed in commit 4089:

https://sourceforge.net/p/staden/code/4089/

It's trivial to apply this manually to tests/Makefile.am if you wish. (Rememebr to rerun ./bootstrap followed by configure again.)

Regards,
James