Short Read Micro re-Aligner Code
Status: Alpha
Brought to you by:
nilshomer
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Tree [baf5f1] master / History
| File | Date | Author | Commit |
|---|---|---|---|
| c-code | 2011-03-23 |
Nils Homer
|
[07e279] * moving master to 0.0.16 |
| java | 2011-06-20 |
Nils Homer
|
[baf5f1] * adding a more verbose error message |
| scripts | 2011-01-20 |
Nils Homer
|
[077b33] Merge branch 'master' of ssh://srma.git.sourcef... |
| README | 2011-02-15 |
Nils Homer
|
[b2d3c9] * updating picard to 1.39 |
Read Me
SRMA - short read micro re-aligner There are two version of SRMA currently: 1. A C-version found in the c-code sub-directory. 2. A Java version found in the java sub-directory. === To Install === ==== Java ==== 1. Move into the java sub-directory. 2. Download sam-1.39.jar and picard-1.39.jar and place them in a folder called lib. 3. Run: ant jar ==== C-code ==== 1. Move into the c-code sub-directory. 2. Run: sh autogen.sh && ./configure && make See the README in the sub-directory for more help. === For more help === see http://srma.sf.net
