[Spglib-users] import spglib error in python2.7
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From: xxliu <xx...@ph...> - 2020-08-06 19:54:10
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Dear all, I try to use the newest version 1.16 now. When I run python setup.py install --user With python3.6 it can run successfully. But with python2.7 there is an error: 7 -I/home/fkp/xxliu/anaconda2/lib/python2.7/site-packages/numpy/core/include -c ../src/spin.c -o build/temp.linux-x86_64-2.7/../src/spin.o ../src/spin.c: In function ‘spn_get_operations_with_site_tensors’: ../src/spin.c:207:8: warning: ‘is_found’ may be used uninitialized in this function [-Wmaybe-uninitialized] if (is_found) { ^ ../src/spin.c:158:31: note: ‘is_found’ was declared here int i, j, k, sign, num_sym, is_found; ^~~~~~~~ gcc -pthread -B /home/fkp/xxliu/anaconda2/compiler_compat -Wl,--sysroot=/ -fno-strict-aliasing -g -O2 -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -fPIC -I../src -I/home/fkp/xxliu/anaconda2/include/python2.7 -I/home/fkp/xxliu/anaconda2/lib/python2.7/site-packages/numpy/core/include -c ../src/spg_database.c -o build/temp.linux-x86_64-2.7/../src/spg_database.o gcc -pthread -B /home/fkp/xxliu/anaconda2/compiler_compat -Wl,--sysroot=/ -fno-strict-aliasing -g -O2 -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -fPIC -I../src -I/home/fkp/xxliu/anaconda2/include/python2.7 -I/home/fkp/xxliu/anaconda2/lib/python2.7/site-packages/numpy/core/include -c ../src/spglib.c -o build/temp.linux-x86_64-2.7/../src/spglib.o gcc -pthread -B /home/fkp/xxliu/anaconda2/compiler_compat -Wl,--sysroot=/ -fno-strict-aliasing -g -O2 -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -fPIC -I../src -I/home/fkp/xxliu/anaconda2/include/python2.7 -I/home/fkp/xxliu/anaconda2/lib/python2.7/site-packages/numpy/core/include -c ../src/symmetry.c -o build/temp.linux-x86_64-2.7/../src/symmetry.o gcc -pthread -shared -B /home/fkp/xxliu/anaconda2/compiler_compat -L/home/fkp/xxliu/anaconda2/lib -Wl,-rpath=/home/fkp/xxliu/anaconda2/lib -Wl,--no-as-needed -Wl,--sysroot=/ build/temp.linux-x86_64-2.7/_spglib.o build/temp.linux-x86_64-2.7/../src/arithmetic.o build/temp.linux-x86_64-2.7/../src/cell.o build/temp.linux-x86_64-2.7/../src/delaunay.o build/temp.linux-x86_64-2.7/../src/debug.o build/temp.linux-x86_64-2.7/../src/determination.o build/temp.linux-x86_64-2.7/../src/hall_symbol.o build/temp.linux-x86_64-2.7/../src/kgrid.o build/temp.linux-x86_64-2.7/../src/kpoint.o build/temp.linux-x86_64-2.7/../src/mathfunc.o build/temp.linux-x86_64-2.7/../src/niggli.o build/temp.linux-x86_64-2.7/../src/overlap.o build/temp.linux-x86_64-2.7/../src/pointgroup.o build/temp.linux-x86_64-2.7/../src/primitive.o build/temp.linux-x86_64-2.7/../src/refinement.o build/temp.linux-x86_64-2.7/../src/sitesym_database.o build/temp.linux-x86_64-2.7/../src/site_symmetry.o build/temp.linux-x86_64-2.7/../src/spacegroup.o build/temp.linux-x86_64-2.7/../src/spin.o build/temp.linux-x86_64-2.7/../src/spg_database.o build/temp.linux-x86_64-2.7/../src/spglib.o build/temp.linux-x86_64-2.7/../src/symmetry.o -L/home/fkp/xxliu/anaconda2/lib -lpython2.7 -o build/lib.linux-x86_64-2.7/spglib/_spglib.so /home/fkp/xxliu/anaconda2/compiler_compat/ld: build/temp.linux-x86_64-2.7/_spglib.o: unable to initialize decompress status for section .debug_info /home/fkp/xxliu/anaconda2/compiler_compat/ld: build/temp.linux-x86_64-2.7/_spglib.o: unable to initialize decompress status for section .debug_info /home/fkp/xxliu/anaconda2/compiler_compat/ld: build/temp.linux-x86_64-2.7/_spglib.o: unable to initialize decompress status for section .debug_info /home/fkp/xxliu/anaconda2/compiler_compat/ld: build/temp.linux-x86_64-2.7/_spglib.o: unable to initialize decompress status for section .debug_info build/temp.linux-x86_64-2.7/_spglib.o: file not recognized: file format not recognized collect2: error: ld returned 1 exit status error: command 'gcc' failed with exit status 1 Can it run under python2.7? Best, Xiaoxiong |