[Spglib-users] import spglib error in python2.7
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From: xxliu <xx...@ph...> - 2020-08-06 19:54:10
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Dear all,
I try to use the newest version 1.16 now.
When I run python setup.py install --user
With python3.6 it can run successfully.
But with python2.7 there is an error:
7
-I/home/fkp/xxliu/anaconda2/lib/python2.7/site-packages/numpy/core/include
-c ../src/spin.c -o build/temp.linux-x86_64-2.7/../src/spin.o
../src/spin.c: In function ‘spn_get_operations_with_site_tensors’:
../src/spin.c:207:8: warning: ‘is_found’ may be used uninitialized in
this function [-Wmaybe-uninitialized]
if (is_found) {
^
../src/spin.c:158:31: note: ‘is_found’ was declared here
int i, j, k, sign, num_sym, is_found;
^~~~~~~~
gcc -pthread -B /home/fkp/xxliu/anaconda2/compiler_compat
-Wl,--sysroot=/ -fno-strict-aliasing -g -O2 -DNDEBUG -g -fwrapv -O3
-Wall -Wstrict-prototypes -fPIC -I../src
-I/home/fkp/xxliu/anaconda2/include/python2.7
-I/home/fkp/xxliu/anaconda2/lib/python2.7/site-packages/numpy/core/include
-c ../src/spg_database.c -o
build/temp.linux-x86_64-2.7/../src/spg_database.o
gcc -pthread -B /home/fkp/xxliu/anaconda2/compiler_compat
-Wl,--sysroot=/ -fno-strict-aliasing -g -O2 -DNDEBUG -g -fwrapv -O3
-Wall -Wstrict-prototypes -fPIC -I../src
-I/home/fkp/xxliu/anaconda2/include/python2.7
-I/home/fkp/xxliu/anaconda2/lib/python2.7/site-packages/numpy/core/include
-c ../src/spglib.c -o build/temp.linux-x86_64-2.7/../src/spglib.o
gcc -pthread -B /home/fkp/xxliu/anaconda2/compiler_compat
-Wl,--sysroot=/ -fno-strict-aliasing -g -O2 -DNDEBUG -g -fwrapv -O3
-Wall -Wstrict-prototypes -fPIC -I../src
-I/home/fkp/xxliu/anaconda2/include/python2.7
-I/home/fkp/xxliu/anaconda2/lib/python2.7/site-packages/numpy/core/include
-c ../src/symmetry.c -o build/temp.linux-x86_64-2.7/../src/symmetry.o
gcc -pthread -shared -B /home/fkp/xxliu/anaconda2/compiler_compat
-L/home/fkp/xxliu/anaconda2/lib -Wl,-rpath=/home/fkp/xxliu/anaconda2/lib
-Wl,--no-as-needed -Wl,--sysroot=/ build/temp.linux-x86_64-2.7/_spglib.o
build/temp.linux-x86_64-2.7/../src/arithmetic.o
build/temp.linux-x86_64-2.7/../src/cell.o
build/temp.linux-x86_64-2.7/../src/delaunay.o
build/temp.linux-x86_64-2.7/../src/debug.o
build/temp.linux-x86_64-2.7/../src/determination.o
build/temp.linux-x86_64-2.7/../src/hall_symbol.o
build/temp.linux-x86_64-2.7/../src/kgrid.o
build/temp.linux-x86_64-2.7/../src/kpoint.o
build/temp.linux-x86_64-2.7/../src/mathfunc.o
build/temp.linux-x86_64-2.7/../src/niggli.o
build/temp.linux-x86_64-2.7/../src/overlap.o
build/temp.linux-x86_64-2.7/../src/pointgroup.o
build/temp.linux-x86_64-2.7/../src/primitive.o
build/temp.linux-x86_64-2.7/../src/refinement.o
build/temp.linux-x86_64-2.7/../src/sitesym_database.o
build/temp.linux-x86_64-2.7/../src/site_symmetry.o
build/temp.linux-x86_64-2.7/../src/spacegroup.o
build/temp.linux-x86_64-2.7/../src/spin.o
build/temp.linux-x86_64-2.7/../src/spg_database.o
build/temp.linux-x86_64-2.7/../src/spglib.o
build/temp.linux-x86_64-2.7/../src/symmetry.o
-L/home/fkp/xxliu/anaconda2/lib -lpython2.7 -o
build/lib.linux-x86_64-2.7/spglib/_spglib.so
/home/fkp/xxliu/anaconda2/compiler_compat/ld:
build/temp.linux-x86_64-2.7/_spglib.o: unable to initialize decompress
status for section .debug_info
/home/fkp/xxliu/anaconda2/compiler_compat/ld:
build/temp.linux-x86_64-2.7/_spglib.o: unable to initialize decompress
status for section .debug_info
/home/fkp/xxliu/anaconda2/compiler_compat/ld:
build/temp.linux-x86_64-2.7/_spglib.o: unable to initialize decompress
status for section .debug_info
/home/fkp/xxliu/anaconda2/compiler_compat/ld:
build/temp.linux-x86_64-2.7/_spglib.o: unable to initialize decompress
status for section .debug_info
build/temp.linux-x86_64-2.7/_spglib.o: file not recognized: file format
not recognized
collect2: error: ld returned 1 exit status
error: command 'gcc' failed with exit status 1
Can it run under python2.7?
Best,
Xiaoxiong
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