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Spectrum Viewer

Spectrum Viewer is meant to be easy to use, so if you find it difficult, please complain at us and we'll do our best to fix it. Our aim is to get a stable, robust spectrum viewer that displays annotations of a particular interpretation of a spectrum, and get all the journals to use it online, instead of static images. This way, reviewers and readers can interrogate important spectra and decide if they really agree. Another function is to make appropriate static figures for the print versions of journals, so authors don't need to do the work twice.

Spectrum viewer is currently in development, but is useable now... please feel free to use it :-)

Currently, we support the display of a single peptide spectrum match, or two peptides matching in the same spectrum, or a cross-linked pair of peptides matching the spectrum. All you need to do is supply the spectrum (text format: mz/ic pairs, just like mgf/msm/apl files) and the peptide sequence. You might also need to provide information on whatever modifications are on your sequence.

So have a go! There's a minimal help menu (top right) to get you started... just click on this link and choose the latest version...

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