spatpg

estimate population size and selection from genetic time-series data

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Last Update: 2015-07-08

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Program to infer variance effective population size and environment-dependent selection based on genetic time-series data (allele frequencies) from multiple populations.

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2015-07-02

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Put your $300 in credit toward real workloads, then keep building with free monthly usage for 20+ products. No commitment and no charge until you upgrade.

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PoPoolation2 allows to compare allele frequencies for SNPs between two or more populations and to identify significant differences. PoPoolation2 requires next generation sequencing data of pooled genomic DNA (Pool-Seq). It may be used for measuring differentiation between populations, for genome wide association studies and for experimental evolution. Documentation: https://sourceforge.net/p/popoolation2/wiki/Main/