Spaced Words Projection (SWeeP), is an application tool capable of generate phylogenetic trees from a large pool of sequences in a reasonably amount of time.

It's the method implementation based on an alignment-free technique, capable of represent biological sequences using relatively small vectors while preserving inter-sequence comparability.

Features

  • Multifasta SWeeP converter
  • SWeeP matrix as a vector small representation of each sequence
  • Phylogenetic tree based on NeighborJoin method

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Registered

2019-02-14
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