[Soaplab-users] quotes

[Sebastien M. <Seb...@un...>]

Hi,

I try to use double quotes in the ACD file for a list.
I must do something wrong because double quotes don't appear in the 
report file where the command line is written.
But I don't know why.

Here is the code for the list
     list: d [
         standard: "Y"
#        template: '-d "$$"'
         comment: 'method -d "$$"'
         default: "swiss"
         comment: "defaults"
         minimum: 1
         values: "nrcrc:non redundant, swiss:SwissProt, 
swisstrembl:UniProt (SwissProt/TrEMBL), trembl_all:TrEMBL, refseq:RefSeq 
protein, ipi:IPI ENSEMBL, gp:GenPept, shuffled:randomized SwissProt, 
microbial:All microbial proteomes (SP format), nrl3d:non redundant 3D 
structure, UniRef100:UniRef100, UniRef90:UniRef90, UniRef50:UniRef50, 
athpep:A. thaliana (from TIGR), worm:Worm (C. elegans), yeast:Yeast (S. 
cerevisiae)"
         delimiter: ", "
         codedelimiter: ":"
         information: "Peptide database used as target."
     ]

And the command line declared in the ACD:
comment: 'method ... $d ...'


Do you know what could be wrong ?
I have tried with \" but nothing appends

Thanks

-- 
Sébastien Moretti
SIB EMBnet, Quartier Sorge - Genopode
CH-1015 Lausanne, Switzerland
Tel.: +41 (21) 692 4056/4221
http://ch.embnet.org/  http://myhits.vital-it.ch/