Re: [Soaplab-users] seqretall, seqretallfeat and seqretset

[Mahmut U. <ul...@eb...>]

> It seems that primers and prima are always enabled.
> There is no update for them via CVS.

I forgot to check in the updated emboss.xml file but it is now in CVS.

> And it seems there is an ACD to XML problem for the density application.
> The web service uses -graph as attribute but this one doesn't exist.
> It should be qgraph or dgraph depending on selection for quad or dual 
> attributes.
> 
> And by default, density doesn't create graph output.
> quad and/or dual have to be used.
> 
> Is it a soaplab known problem ?

Yes. A problem dictated by the current acd2xml parser which assumes only
one graphics output named 'graph'. Alan's updated density.acd and
density.c files fixed the above problem in my local Soaplab
installation.

Regards,
Mahmut