Re: [Soaplab-users] seqretall, seqretallfeat and seqretset
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From: Sebastien M. <Seb...@un...> - 2008-10-22 14:54:57
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+ primers (replaced by eprimer3 !) > + prima (replaced by eprimer3 ?) > >> Also idem for complex >> >>> Idem for seqrettype ! >>> >>> >>>> P.S.: seqretallfeat is already disabled ! >>>> >>>> >>>> Hello, >>>> >>>> It seems that these three software are not available by default in >>>> EMBOSS: >>>> cf. src/ChangeLog >>>> (Since) Version 2.3.0 >>>> >>>> Seqretall, seqretallfeat and seqretset moved to 'make check'. >>>> Seqret has all the functionality of the above. >>>> >>>> >>>> You need to make a 'make check' then to copy manually these programs to >>>> your PATH because 'make install' does not seem to do this. >>>> >>>> >>>> So, ACD files for them are with the other ACD files. >>>> I mean that they become available via soaplab. >>>> But they cannot be run by default. >>>> >>>> It fails for me locally and it is the same from >>>> http://www.ebi.ac.uk/soaplab/ >>>> >>>> >>>> So, should these three programs be disabled in the xmls/emboss.xml >>>> file ? >>>> Else you should add a remark in the Soaplab documentation >>>> (EmbossNotes.html). >>>> >>>> Best regards -- Sébastien Moretti SIB EMBnet, Quartier Sorge - Genopode CH-1015 Lausanne, Switzerland Tel.: +41 (21) 692 4056/4221 http://ch.embnet.org/ http://myhits.vital-it.ch/ |