Re: [Soaplab-users] seqretall, seqretallfeat and seqretset
Brought to you by:
marsenger
From: Sebastien M. <Seb...@un...> - 2008-10-22 14:53:04
|
+ prima (replaced by eprimer3 ?) > Also idem for complex > >> Idem for seqrettype ! >> >> >>> P.S.: seqretallfeat is already disabled ! >>> >>> >>> Hello, >>> >>> It seems that these three software are not available by default in >>> EMBOSS: >>> cf. src/ChangeLog >>> (Since) Version 2.3.0 >>> >>> Seqretall, seqretallfeat and seqretset moved to 'make check'. >>> Seqret has all the functionality of the above. >>> >>> >>> You need to make a 'make check' then to copy manually these programs to >>> your PATH because 'make install' does not seem to do this. >>> >>> >>> So, ACD files for them are with the other ACD files. >>> I mean that they become available via soaplab. >>> But they cannot be run by default. >>> >>> It fails for me locally and it is the same from >>> http://www.ebi.ac.uk/soaplab/ >>> >>> >>> So, should these three programs be disabled in the xmls/emboss.xml >>> file ? >>> Else you should add a remark in the Soaplab documentation >>> (EmbossNotes.html). >>> >>> Best regards -- Sébastien Moretti SIB EMBnet, Quartier Sorge - Genopode CH-1015 Lausanne, Switzerland Tel.: +41 (21) 692 4056/4221 http://ch.embnet.org/ http://myhits.vital-it.ch/ |