Re: [Soaplab-users] Problem with Infile Path

[Martin S. <mar...@gm...>]

> No, my application is the Soaplab service.


If you application is the one called by a Soaplab service, then it gets data
without using any shell. Therefore, it is, indeed, your application that is
not able to use a parameter that has special characters.

I have just tried to rename
>
> /opt/tomcat/temp/_R_/SANDBOX/[protein_2d_structure.tmpred]4a976779.118f46927cf.-7ffe/


No, you cannot rename it: this file name (and the file itself) is created
every time a Soaplab service is called. You do not have access to a file to
rename it in the right time.

You need to look into your application how it parses and uses parameters. If
you cannot do it (because it's too old or not well readable etc.) you need
to write a script that will warp it - and this script will read the file
name given to it by Soaplab, will copy the fiole to a temporary directory
and will pass a new name to your application itself (together with the other
parameters gotten from the Soaplab service).

Martin

-- 
Martin Senger
email: mar...@gm...,m.s...@cg...
skype: martinsenger