When I run make, I get this output.
cd ./src/Kmerfreq_AR && make make[1]: Entering directory `/gscratch/srlab/programs/SOAPec_src_v2.03/src/Kmerfreq_AR' g++ main.o seqKmer.o estimateGenome.o gzstream.o -lz -lpthread -static -O3 -o KmerFreq_AR /usr/bin/ld: cannot find -lz /usr/bin/ld: cannot find -lstdc++ /usr/lib/gcc/x86_64-redhat-linux/4.8.5/../../../../lib64/libpthread.a(libpthread.o): In function `sem_open': (.text+0x682b): warning: the use of `mktemp' is dangerous, better use `mkstemp' collect2: error: ld returned 1 exit status make[1]: *** [KmerFreq_AR] Error 1 make[1]: Leaving directory `/gscratch/srlab/programs/SOAPec_src_v2.03/src/Kmerfreq_AR' make: *** [KMER_AR] Error 2
I'm trying to install this on an HPC node, so I do not have root/sudo access.
I'm not sure how to resolve this. Any info would be greatly appreciated.
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When I run make, I get this output.
I'm trying to install this on an HPC node, so I do not have root/sudo access.
I'm not sure how to resolve this. Any info would be greatly appreciated.