SNeP - Historical Ne Trends Activity
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Activity for SNeP - Historical Ne Trends
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SNeP - Historical Ne Trends updated /README.txt
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MARIA ESTHER NIETO BLAZQUEZ posted a comment on discussion General Discussion
Hi everyone, I'm trying to run SNeP in a Linux environment. Previously I tried on a Windows desktop but hit memory problem. Trying to run the program (https://sourceforge.net/projects/snepnetrends/) in a cluster, I'm having problems with some libraries. See below: [s_menb@claudius SNeP]$ ./SNeP_111 -ped beech_cohort98indivs_R2_genotyped_SNPs.vcf_filteredPASSED.ped.ped -map beech_cohort98indivs_R2_genotyped_SNPs.vcf_filteredPASSED.ped.map ./SNeP_111: /lib64/libm.so.6: version GLIBC_2.29' not found...
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Anubhab Khan posted a comment on discussion General Discussion
Hi, I tried running SNeP1.1 with the following argument: ./SNeP1.1 -ped ~/file.ped My .map file has several chromosomes but I get the following message from the program: Number of Chromosomes detected: 1 Is there an error? Also, it did end up creating a .NeAll file. However, the Ne values are too low. Are the Ne values scaled by a factor? thanks A
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Mario Barbato modified a wiki page
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