Snagger / News: Recent posts

Add-on to Haploview that picks tagSNPs while allowing for: (1) preferential selection based on user-defined criteria, (2) selection across multiple populations, (3) selection outside defined genomic regions, and (4) picking of surrogate (backup) tagSNPs.

Version 1.09 of the source code and executable JAR file are now available. This is a critical update which fixes a couple of bugs. Please see the change log for details.

Add-on to Haploview that picks tagSNPs while allowing for: (1) preferential selection based on user-defined criteria, (2) selection across multiple populations, (3) selection outside defined genomic regions, and (4) picking of surrogate (backup) tagSNPs.

Version 1.08 of the source code and executable JAR file are now available. This is a critical update which fixes a Haploview 3.32 bug where MAF and LD values were calculated incorrectly for chromosome X SNPs.

An peer-reviewed article has been published in BMC Bioinformatics:

Snagger: A user-friendly program for incorporating additional information for tagSNP selection

BMC Bioinformatics 2008, 9:174
http://www.biomedcentral.com/1471-2105/9/174

Version 1.07 of the source code and executable JAR file are now available.

Version 1.05 of the source code and executable JAR file are now available.