<REDACTED> modified a wiki page

Bugs

<REDACTED> renamed a wiki page

Bugs

sirfast released /sirfast-0.0.0.1/sirfast.zip

sirfast released /sirfast-0.0.0.1/CG_generator/generator

sirfast released /sirfast-0.0.0.1/CG_generator/Makefile

sirfast released /sirfast-0.0.0.1/ReadSlice/SirFAST.h

sirfast released /sirfast-0.0.0.1/CG_generator/function.cpp

sirfast released /sirfast-0.0.0.1/CG_generator/function.h

sirfast released /sirfast-0.0.0.1/CG_generator/generator.cpp

sirfast released /sirfast-0.0.0.1/ReadSlice/HashTable.h

sirfast released /sirfast-0.0.0.1/ReadSlice/RefGenome.c

sirfast released /sirfast-0.0.0.1/ReadSlice/Common.c

sirfast released /sirfast-0.0.0.1/ReadSlice/Reads.c

sirfast released /sirfast-0.0.0.1/ReadSlice/Makefile

sirfast released /sirfast-0.0.0.1/ReadSlice/Reads.h

sirfast released /sirfast-0.0.0.1/ReadSlice/Output.h

sirfast released /sirfast-0.0.0.1/ReadSlice/CommandLineParser.h

sirfast released /sirfast-0.0.0.1/ReadSlice/run.sh

sirfast released /sirfast-0.0.0.1/ReadSlice/Common.h

sirfast released /sirfast-0.0.0.1/ReadSlice/SirFAST.c

sirfast released /sirfast-0.0.0.1/ReadSlice/RefGenome.h

sirfast released /sirfast-0.0.0.1/ReadSlice/baseFAST.c

sirfast released /sirfast-0.0.0.1/ReadSlice/sirfast

sirfast released /sirfast-0.0.0.1/ReadSlice/Output.c

sirfast released /sirfast-0.0.0.1/ReadSlice/HashTable.c

sirfast released /sirfast-0.0.0.1/ReadSlice/CommandLineParser.c

sirfast released /ReadSlice/Makefile

sirfast released /ReadSlice/Common.h

sirfast released /ReadSlice/HashTable.c

sirfast released /ReadSlice/Common.c

sirfast released /ReadSlice/CommandLineParser.h

sirfast released /ReadSlice/HashTable.h

sirfast released /ReadSlice/baseFAST.c

sirfast released /ReadSlice/CommandLineParser.c

sirfast released /ReadSlice/sirfast

sirfast released /ReadSlice/run.sh

sirfast released /ReadSlice/RefGenome.c

sirfast released /ReadSlice/Output.h

sirfast released /ReadSlice/Output.c

sirfast released /ReadSlice/SirFAST.c

sirfast released /ReadSlice/Reads.c

sirfast released /ReadSlice/RefGenome.h

sirfast released /ReadSlice/SirFAST.h

sirfast released /ReadSlice/Reads.h

sirfast released /sirfast-0.0.0.1/Sample/reads_2nd_sample

sirfast released /sirfast-0.0.0.1/test.c

sirfast released /sirfast-0.0.0.1/RefGenome.h

sirfast released /sirfast-0.0.0.1/Makefile

sirfast released /sirfast-0.0.0.1/SirFAST.c

sirfast released /sirfast-0.0.0.1/RefGenome.c

sirfast released /sirfast-0.0.0.1/Output.h

sirfast released /sirfast-0.0.0.1/run.sh

sirfast released /sirfast-0.0.0.1/Reads.c

sirfast released /sirfast-0.0.0.1/HashTable.h

sirfast released /sirfast-0.0.0.1/Common.c

sirfast released /sirfast-0.0.0.1/sirfast

sirfast released /sirfast-0.0.0.1/SirFAST.h

sirfast released /sirfast-0.0.0.1/CommandLineParser.h

sirfast released /sirfast-0.0.0.1/baseFAST.c

sirfast released /sirfast-0.0.0.1/CommandLineParser.c

sirfast released /sirfast-0.0.0.1/Reads.h

sirfast released /sirfast-0.0.0.1/Common.h

sirfast released /sirfast-0.0.0.1/HashTable.c

sirfast released /sirfast-0.0.0.1/Output.c

FARHAD I. HORMOZDIARI committed [17f188]

Pair-end is working with some minor bugs

FARHAD I. HORMOZDIARI committed [5b92ac]

seg fault beacuse of cal is fix(loadgenome is u...

FARHAD I. HORMOZDIARI committed [501b0b]

sequnce name added

Can Alkan committed [503d9e]

port to mrfast 2.5.0.1 codebase

FARHAD I. HORMOZDIARI committed [0c76e6]

seg fault beacuse of cal is fix(loadgenome is u...

Can Alkan committed [ea5965]

Merged with mrfast 2.5.1.0

FARHAD I. HORMOZDIARI committed [1c951c]

Start fixing the PE

FARHAD I. HORMOZDIARI committed [00185a]

Merge branch 'master' of https://bitbucket.org/...

FARHAD I. HORMOZDIARI committed [6af6f4]

fix memory leak introduced by Dongh

Can Alkan committed [b4aeb2]

initialization

Donghyuk Lee committed [1b0b50]

fix se bug and polish code

FARHAD I. HORMOZDIARI committed [a385f7]

seg fault beacuse of cal is fix(loadgenome is u...

FARHAD I. HORMOZDIARI committed [4317fd]

fix single-end for simulated data Dongh fix sma...

Can Alkan committed [6e2fa8]

apply 2.5.0.2 fix

Can Alkan committed [42f008]

cosmetic changes

FARHAD I. HORMOZDIARI committed [da981e]

Clean the Single-end mapping functions

FARHAD I. HORMOZDIARI committed [82b454]

Single-end fix and SAM

FARHAD I. HORMOZDIARI committed [a4fbe4]

pe the insert size is fixed

Can Alkan committed [3b3f8b]

autoset errthreshold

FARHAD I. HORMOZDIARI committed [97209a]

merge to version 2.4.0.5 mrFAST

Can Alkan committed [f004d6]

removed a leftover printf

FARHAD I. HORMOZDIARI committed [e4db13]

fix PE SAM

Donghyuk Lee committed [08c596]

minor changes

FARHAD I. HORMOZDIARI committed [5c4fbb]

add quality fix some bugs

Can Alkan committed [be99a1]

omp directory in progress

Donghyuk Lee committed [b66f1c]

fixing seg fault which is caused by reads name

Can Alkan committed [f47338]

further fix of freeReads. read name prefixes ar...

Can Alkan committed [d0bec1]

read name suffix fix

FARHAD I. HORMOZDIARI committed [3fcda6]

Fix sam and minor bug

Can Alkan committed [c9fb89]

verifiedlocs now protected. there is still a bu...

Can Alkan committed [9cd927]

OMP: AI problem fixed, slightly diff output if ...

donghyu1 committed [2ea146]

minor change

Donghyuk Lee committed [ac44e8]

minor changes

Can Alkan committed [92ef5e]

extractreads bug fixed in all versions, omp ver...