This Shiny app provides a user-friendly interface for performing Weighted Gene Co-expression Network Analysis (WGCNA) on RNA-seq/Microarray and DNA methylation (Array/Sequencing) data. It allows for data upload, parameter customization, visualization of results, and exporting of analysis outputs.
Online webserver

https://shinywgcna.serve.scilifelab.se/app/shinywgcna

PLEASE NOTE Datasets with larger dimensions (e.g., 1000x100) may fail on the server,because it is only running on 1GB RAM allocation. Please use the Docker container in local machine

docker run --rm -p 3838:3838 jd21/shinywgcna:latest

Features

  • WGCNA
  • RNA sequencing
  • Transcriptomics
  • DNA Methylation
  • Epigenomics
  • Module-trait Correlation
  • Heatmap

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Registered

2025-08-19
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