Version 1.0.1 updated

Note: the version 1.0.1 uploaded on June 13th, 2005 was not properly tested under Linux and it was found that newer installations contained C headers that defined getopt in a different location than earlier versions of various linux distributions, and other OS's like MacOSX 10.4 and earlier. This was a simple fix to autoconf to determine which header is necessary. Refer to the release notes for 1.0.1 to find the list of features/fixes that are contained in this release.