[Seqware-devel] Changes to how the database is built

[Morgan T. <Mor...@oi...>]

Hi all,

I've simplified the process of building the database and testing the database. The seqware-meta-db module in SVN now has a class, DatabaseCreator, that will construct the testing database at testtime. The .sql files are located in src/main/resources/net/sourceforge/seqware/metadb/util but I have also created symlinks in the root directory for seqware-meta-db.

Also, I have created a document that details how to create and update the three sql files at https://wiki.oicr.on.ca/display/SEQWARE/Changing+the+MetaDB (sorry, this is an OICR internal link for now. I will also put it on the external wiki at some point).

Please let me know if you have any comments or questions.

--
Morgan Taschuk
Bioinformatics Pipeline Developer
Tel: 647-260-7991

Ontario Institute for Cancer Research
MaRS Centre, South Tower
101 College Street, Suite 800
Toronto, Ontario, Canada M5G 0A3

Toll-free: 1-866-678-6427
www.oicr.on.ca

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