[Senseclusters-users] Fwd: Re: Senseclusters installation problems
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[Senseclusters-users] Fwd: Re: Senseclusters installation problems
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From: Alfredo M. G. <alf...@wo...> - 2015-03-16 10:57:34
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Resending as I sent this from a new email address that needed to be registered in the mailing list. Sorry to jump in here. Installing PDL on Ubuntu should be very straight forward from the command line: sudo apt-get install pdl pgplot5 libpgplot-perl This *should* also install other PDL dependencies. More info on http://pdl.perl.org/?page=install Thanks, Alfredo On Monday 16 March 2015 04:41:40 Ted Pedersen wrote: This is something you do from the command line. Are you using CPAN to install the modules? If so, then what you can do is cpan > force install PDL So these are two commands you run from the command line (in sudo mode). I hope this helps, and that it works! Good luck, Ted On Sun, Mar 15, 2015 at 3:00 PM, <jc...@an...[1]> wrote: Hi, Sorry I am not very familiar with perl, which file should I modify to addthese lines? Or are these the command that I should type in my shell? Ifyou can provide more detail about how to fix this PDL issue I will bereally appreciated. Thanks! _j...@an..._> wrote:>>> Hi,>>>> After I install F77 and ExtUtils:F77, the error messages are definitely>> different now. Yet while installing PDL, at the end it still shows>>>> ****>> Cannot find Proj library, libproj.a. Please add the correct>> library path to Makefile.PL or install Proj. Cannot find Proj>> header file, proj_api.h. Please add the correct library path>> to Makefile.PL or install Proj. Skipping build of PDL::GIS::Proj.>> ****>> make[3]: Leaving directory>> `/usr1/jchiu1/.cpan/build/PDL-2.007-ifLc9Q/Lib/GIS/Proj'>> make[3]: Entering directory>> `/usr1/jchiu1/.cpan/build/PDL-2.007- ifLc9Q/Lib/GIS/Proj'>> ****>> Cannot find Proj library, libproj.a. Please add the correct>> library path to Makefile.PL or install Proj. Cannot find Proj>> header file, proj_api.h. Please add the correct library path>> to Makefile.PL or install Proj. Skipping build of PDL::GIS::Proj.>> ****>> make[3]: Leaving directory>> `/usr1/jchiu1/.cpan/build/PDL-2.007-ifLc9Q/Lib/GIS/Proj'>> make[2]: Leaving directory>> `/usr1/jchiu1/.cpan/build/PDL-2.007-ifLc9Q/Lib/GIS'>> make[2]: Entering directory>> `/usr1/jchiu1/.cpan/build/PDL-2.007- ifLc9Q/Lib/Transform'>> make[3]: Entering directory>> `/usr1/jchiu1/.cpan/build/PDL-2.007-ifLc9Q/Lib/Transform/Cartography'>> make[3]: Leaving directory>> `/usr1/jchiu1/.cpan/build/PDL-2.007- ifLc9Q/Lib/Transform/Cartography'>> make[3]: Entering directory>> `/usr1/jchiu1/.cpan/build/PDL-2.007-ifLc9Q/Lib/Transform/Proj4'>> ****>> Will skip build of PDL::Transform::Proj4 on this system>> ****>> make[3]: Leaving directory>> `/usr1/jchiu1/.cpan/build/PDL-2.007- ifLc9Q/Lib/Transform/Proj4'>> make[3]: Entering directory>> `/usr1/jchiu1/.cpan/build/PDL-2.007-ifLc9Q/Lib/Transform/Cartography'>> No tests defined for PDL::Transform::Cartography extension.>> make[3]: Leaving directory>> `/usr1/jchiu1/.cpan/build/PDL-2.007- ifLc9Q/Lib/Transform/Cartography'>> make[3]: Entering directory>> `/usr1/jchiu1/.cpan/build/PDL-2.007-ifLc9Q/Lib/Transform/Proj4'>> ****>> Will skip build of PDL::Transform::Proj4 on this system>> ****>> make[3]: Leaving directory>> `/usr1/jchiu1/.cpan/build/PDL-2.007- ifLc9Q/Lib/Transform/Proj4'>> make[2]: Leaving directory>> `/usr1/jchiu1/.cpan/build/PDL-2.007-ifLc9Q/Lib/Transform'>> make[2]: Entering directory>> `/usr1/jchiu1/.cpan/build/PDL-2.007- ifLc9Q/Lib/Minuit'>> No tests defined for PDL::Minuit extension.>> make[2]: Leaving directory>> `/usr1/jchiu1/.cpan/build/PDL-2.007- ifLc9Q/Lib/Minuit'>> make[2]: Entering directory>> `/usr1/jchiu1/.cpan/build/PDL-2.007-ifLc9Q/Lib/Compression'>> No tests defined for PDL::Compression extension.>> make[2]: Leaving directory>> `/usr1/jchiu1/.cpan/build/PDL-2.007-ifLc9Q/Lib/Compression'>> make[1]: Leaving directory>> `/usr1/jchiu1/.cpan/build/PDL-2.007-ifLc9Q/Lib'>> make[1]: Entering directory>> `/usr1/jchiu1/.cpan/build/PDL-2.007- ifLc9Q/Perldl2'>> make[2]: Entering directory>> `/usr1/jchiu1/.cpan/build/PDL-2.007-ifLc9Q/Perldl2/Profile'>> make[2]: Leaving directory>> `/usr1/jchiu1/.cpan/build/PDL-2.007- ifLc9Q/Perldl2/Profile'>> make[2]: Entering directory>> `/usr1/jchiu1/.cpan/build/PDL-2.007-ifLc9Q/Perldl2/Plugin'>> make[2]: Leaving directory>> `/usr1/jchiu1/.cpan/build/PDL-2.007- ifLc9Q/Perldl2/Plugin'>> /usr/bin/perl -MPod::Select -e "podselect('pdl2');" > pdl2.pod>> Skip ../blib/lib/PDL/Perldl2/Script.pm (unchanged)>> Skip ../blib/lib/PDL/pdl2.pod (unchanged)>> make[2]: Entering directory>> `/usr1/jchiu1/.cpan/build/PDL-2.007-ifLc9Q/Perldl2/Profile'>> No tests defined for PDL::Perldl2::Profile extension.>> make[2]: Leaving directory>> `/usr1/jchiu1/.cpan/build/PDL-2.007-ifLc9Q/Perldl2/Profile'>> make[2]: Entering directory>> `/usr1/jchiu1/.cpan/build/PDL-2.007- ifLc9Q/Perldl2/Plugin'>> No tests defined for PDL::Perldl2::Plugin extension.>> make[2]: Leaving directory>> `/usr1/jchiu1/.cpan/build/PDL-2.007-ifLc9Q/Perldl2/Plugin'>> make[1]: Leaving directory>> `/usr1/jchiu1/.cpan/build/PDL-2.007-ifLc9Q/Perldl2'>> CHM/PDL-2.007.tar.gz>> Tests succeeded but one dependency not OK (Module::Compile)>> CHM/PDL-2.007.tar.gz>> [dependencies] -- NA>> Running make install>> make test had returned bad status, won't install without force>>>> It seems like there is some Proj4 stuff missing? I wonder is there any>> other toolkit I need to install.>>>> Justin>>>> > It looks like this has to do with ExtUtils::F77. Do you have a fortran>> > compiler installed? :) If not, go ahead and install one (usually the>> name>> > includes f77). Then install ExtUtils::F77 individually, and then try>> PDL>> > again. This is a PDL dependency issue and so doesn't really have much>> to>> > do>> > with SenseClusters itself, but it's something I've run into from time>> to>> > time. Hopefully this gets all the dependencies installed so that>> > SenseClusters can then be re- installed.>> >>> > Let us know how it goes.>> >>> > Good luck,>> > Ted>> >>> > On Fri, Mar 13, 2015 at 8:56 PM, <_j...@an..._> wrote:>> >>> >> Hi,>> >>>> >> When I directly use the command "sudo perl -MCPAN -e 'install PDL' ;">> to>> >> install PDL, the message shows up>> >>>> >> make[3]: Leaving directory>> >> `/usr1/jchiu1/.cpan/build/PDL-2.007-3VrP6p/Lib/GIS/Proj'>> >> make[2]: Leaving directory>> >> `/usr1/jchiu1/.cpan/build/PDL-2.007-3VrP6p/Lib/GIS'>> >> make[2]: Entering directory>> >> `/usr1/jchiu1/.cpan/build/PDL-2.007-3VrP6p/Lib/Transform'>> >> make[3]: Entering directory>> >> `/usr1/jchiu1/.cpan/build/PDL-2.007-3VrP6p/Lib/Transform/Cartography'>> >> make[3]: Leaving directory>> >> `/usr1/jchiu1/.cpan/build/PDL-2.007-3VrP6p/Lib/Transform/Cartography'>> >> make[3]: Entering directory>> >> `/usr1/jchiu1/.cpan/build/PDL-2.007-3VrP6p/Lib/Transform/Proj4'>> >> ****>> >> Will skip build of PDL::Transform::Proj4 on this system>> >> ****>> >> make[3]: Leaving directory>> >> `/usr1/jchiu1/.cpan/build/PDL-2.007-3VrP6p/Lib/Transform/Proj4'>> >> make[3]: Entering directory>> >> `/usr1/jchiu1/.cpan/build/PDL-2.007-3VrP6p/Lib/Transform/Cartography'>> >> No tests defined for PDL::Transform::Cartography extension.>> >> make[3]: Leaving directory>> >> `/usr1/jchiu1/.cpan/build/PDL-2.007-3VrP6p/Lib/Transform/Cartography'>> >> make[3]: Entering directory>> >> `/usr1/jchiu1/.cpan/build/PDL-2.007-3VrP6p/Lib/Transform/Proj4'>> >> ****>> >> Will skip build of PDL::Transform::Proj4 on this system>> >> ****>> >> make[3]: Leaving directory>> >> `/usr1/jchiu1/.cpan/build/PDL-2.007-3VrP6p/Lib/Transform/Proj4'>> >> make[2]: Leaving directory>> >> `/usr1/jchiu1/.cpan/build/PDL-2.007-3VrP6p/Lib/Transform'>> >> make[2]: Entering directory>> >> `/usr1/jchiu1/.cpan/build/PDL-2.007-3VrP6p/Lib/Minuit'>> >> ****>> >> Can't locate ExtUtils/F77.pm in @INC (@INC contains:>> >> /usr1/jchiu1/.cpan/build/PDL-2.007-3VrP6p/inc /etc/perl>> >> /usr0/local/lib/perl/5.14.2 /usr0/local/share/perl/5.14.2>> /usr/lib/perl5>> >> /usr/share/perl5 /usr/lib/perl/5.14.2 /usr/share/perl/5.14.2>> >> /usr/local/lib/site_perl /usr1/jchiu1/.cpan/build/PDL-2.007-3VrP6p>> >> /usr1/jchiu1/.cpan/build/PDL-2.007-3VrP6p/Lib .) at (eval 250) line>> >> 2.BEGIN failed--compilation aborted at (eval 250) line 2.>> >> ExtUtils::F77>> >> module not found. Ought not build PDL::Minuit>> >> ****>> >> make[2]: Leaving directory>> >> `/usr1/jchiu1/.cpan/build/PDL-2.007-3VrP6p/Lib/Minuit'>> >> make[2]: Entering directory>> >> `/usr1/jchiu1/.cpan/build/PDL-2.007-3VrP6p/Lib/Compression'>> >> No tests defined for PDL::Compression extension.>> >> make[2]: Leaving directory>> >> `/usr1/jchiu1/.cpan/build/PDL-2.007-3VrP6p/Lib/Compression'>> >> make[1]: Leaving directory>> >> `/usr1/jchiu1/.cpan/build/PDL-2.007-3VrP6p/Lib'>> >> make[1]: Entering directory>> >> `/usr1/jchiu1/.cpan/build/PDL-2.007-3VrP6p/Perldl2'>> >> make[2]: Entering directory>> >> `/usr1/jchiu1/.cpan/build/PDL-2.007-3VrP6p/Perldl2/Profile'>> >> make[2]: Leaving directory>> >> `/usr1/jchiu1/.cpan/build/PDL-2.007-3VrP6p/Perldl2/Profile'>> >> make[2]: Entering directory>> >> `/usr1/jchiu1/.cpan/build/PDL-2.007-3VrP6p/Perldl2/Plugin'>> >> make[2]: Leaving directory>> >> `/usr1/jchiu1/.cpan/build/PDL-2.007-3VrP6p/Perldl2/Plugin'>> >> /usr/bin/perl -MPod::Select -e "podselect('pdl2');" > pdl2.pod>> >> Skip ../blib/lib/PDL/Perldl2/Script.pm (unchanged)>> >> Skip ../blib/lib/PDL/pdl2.pod (unchanged)>> >> make[2]: Entering directory>> >> `/usr1/jchiu1/.cpan/build/PDL-2.007-3VrP6p/Perldl2/Profile'>> >> No tests defined for PDL::Perldl2::Profile extension.>> >> make[2]: Leaving directory>> >> `/usr1/jchiu1/.cpan/build/PDL-2.007-3VrP6p/Perldl2/Profile'>> >> make[2]: Entering directory>> >> `/usr1/jchiu1/.cpan/build/PDL-2.007-3VrP6p/Perldl2/Plugin'>> >> No tests defined for PDL::Perldl2::Plugin extension.>> >> make[2]: Leaving directory>> >> `/usr1/jchiu1/.cpan/build/PDL-2.007-3VrP6p/Perldl2/Plugin'>> >> make[1]: Leaving directory>> >> `/usr1/jchiu1/.cpan/build/PDL-2.007-3VrP6p/Perldl2'>> >> CHM/PDL-2.007.tar.gz>> >> Tests succeeded but one dependency not OK (Module::Compile)>> >> CHM/PDL-2.007.tar.gz>> >> [dependencies] -- NA>> >> Running make install>> >> make test had returned bad status, won't install without force>> >>>> >> It seems like a similar errors. Actually I think most of the required>> >> component shows up similar errors. Thanks.>> >>>> >> Justin>> >>>> >> > It looks like PDL failed to install. Did you try and install PDL>> >> > separately? If so, what kind of errors did you get with that?>> >> >>> >> > Thanks!>> >> > Ted>> >> >>> >> > On Fri, Mar 13, 2015 at 3:42 PM, <_j...@an..._> wrote:>> >> >>> >> >> Hi All,>> >> >>>> >> >> Right now I am trying to install Senseclusters on my ubuntu>> machine.>> >> I>> >> >> do>> >> >> have sudo account, so I just use the "perl -MCPAN -e 'install>> >> >> Bundle::Text::SenseClusters';" command as the documentation>> >> mentioned.>> >> >>>> >> >> However, after the process is completed, there is no perl script>> >> >> installed>> >> >> to my /usr/local/bin folder. At the end of the installation, it>> says>> >> >>>> >> >> Running make test>> >> >> PERL_DL_NONLAZY=1 /usr/bin/perl "- MExtUtils::Command::MM">> >> >> "-MTest::Harness" "-e" "undef *Test::Harness::Switches;>> >> test_harness(0,>> >> >> 'blib/lib', 'blib/arch')" t/*.t>> >> >> t/Text-SenseClusters.t .. ok>> >> >> All tests successful.>> >> >> Files=1, Tests=1, 0 wallclock secs ( 0.01 usr 0.00 sys + 0.01>> cusr>> >> >> 0.00 csys = 0.02 CPU)>> >> >> Result: PASS>> >> >> TPEDERSE/Text-SenseClusters-1.03.tar.gz>> >> >> Tests succeeded but one dependency not OK (PDL)>> >> >> TPEDERSE/Text- SenseClusters-1.03.tar.gz>> >> >> [dependencies] -- NA>> >> >> Running make install>> >> >> make test had returned bad status, won't install without force>> >> >> Running install for module 'Module::Compile'>> >> >> Running make install>> >> >> make test had returned bad status, won't install without force>> >> >> Running make for C/CH/CHM/PDL-2.007.tar.gz>> >> >> Has already been unwrapped into directory>> >> >> /usr1/jchiu1/.cpan/build/PDL-2.007- M4Shkn>> >> >> Warning: Prerequisite 'Module::Compile => 0.23' for>> >> >> 'CHM/PDL-2.007.tar.gz'>> >> >> failed when processing 'INGY/Module-Compile-0.35.tar.gz' with>> >> 'make_test>> >> >> => NO'. Continuing, but chances to succeed are limited.>> >> >> Has already been made>> >> >> Running make test>> >> >> Has already been tested within this command>> >> >> Running make install>> >> >> make test had returned bad status, won't install without force>> >> >>>> >> >> So I try to manually install each of the component, and it still>> >> shows>> >> >> the>> >> >> same error. (Seems like the make install step just can't work as>> it>> >> >> should) Does anyone know how to fix that? Thank you for reading>> this>> >> >> e-mail.>> >> >>>> >> >> Justin>> >> >>>> >> >>>> >> >>>> >> >>>> >> >>>> >> >>>> >>>> ------------------------------------------------------------------------------ >> >> >> Dive into the World of Parallel Programming The Go Parallel>> Website,>> >> >> sponsored>> >> >> by Intel and developed in partnership with Slashdot Media, is your>> >> hub>> >> >> for>> >> >> all>> >> >> things parallel software development, from weekly thought>> leadership>> >> >> blogs>> >> >> to>> >> >> news, videos, case studies, tutorials and more. Take a look and>> join>> >> the>> >> >> conversation now. http://goparallel.sourceforge.net/[2] |
