Re: [SED-ML-discuss] Level 1 Version 3?

[Herbert S. <uw....@gm...>]

So does the current L1V3 specify how data can be referenced from
spreadsheets? Is there support for this in libSEDML or I wonder if JWS
has hand crafted their own code?

Herbert

On Tue, May 16, 2017 at 3:29 PM, David Nickerson
<dav...@gm...> wrote:
> yes, we decided at COMBINE 2016 to move to something more in line with
> CSV or Excel rather than NuML. But this has not yet been written up in
> the specification. Part of the problem we currently have is that the
> "current state" of SED-ML is only captured across a couple of google
> docs, some email treads, and the draft L1V3 specification. Hopefully
> this will be something we can address during HARMONY.
>
> Also, while JWS does make use of L1V3 to link to data, they are using
> data from Excel spreadsheets - one of the main driving use-cases for
> the move away from NuML.
>
> Cheers,
> David.
>
>
> On 17 May 2017 at 08:01, Herbert Sauro <uw....@gm...> wrote:
>> I see. Wasn't it decidedin COMBINE 2016 that we wouldn't be using NuML
>> or at least priority had moved to using Excel like data sources?
>> Something like that.
>>
>> On another note:
>>
>> Might be worth adding a summary of changes in the main spec document
>> as new versions are released.
>>
>> Herbert
>>
>>
>> On Tue, May 16, 2017 at 12:55 PM, Frank T. Bergmann
>> <fbe...@ca...> wrote:
>>> Hello Herbert
>>>
>>> Version 3 extends the SED-ML language to include addressing of
>>> external data files, by introducing the datasource construct ... the
>>> summary is here:
>>>
>>> https://github.com/fbergmann/sedml-data-proposal
>>>
>>> cheers
>>> Frank
>>>
>>> On Tue, May 16, 2017 at 9:48 PM, Herbert Sauro <uw....@gm...> wrote:
>>>> I just noticed that JWS Online uses Level 1 Version 3 of SED-ML.
>>>>
>>>> What's the difference between Version 2 and 3? I couldn't find a
>>>> summary of the differences in the draft document for Version 3.
>>>>
>>>> Herbert
>>>>
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>
>
> --
>
>
> David Nickerson
> about.me/david.nickerson
>
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