Re: [SED-ML-discuss] Level 1 Version 3?

[David N. <dav...@gm...>]

yes, we decided at COMBINE 2016 to move to something more in line with
CSV or Excel rather than NuML. But this has not yet been written up in
the specification. Part of the problem we currently have is that the
"current state" of SED-ML is only captured across a couple of google
docs, some email treads, and the draft L1V3 specification. Hopefully
this will be something we can address during HARMONY.

Also, while JWS does make use of L1V3 to link to data, they are using
data from Excel spreadsheets - one of the main driving use-cases for
the move away from NuML.

Cheers,
David.


On 17 May 2017 at 08:01, Herbert Sauro <uw....@gm...> wrote:
> I see. Wasn't it decidedin COMBINE 2016 that we wouldn't be using NuML
> or at least priority had moved to using Excel like data sources?
> Something like that.
>
> On another note:
>
> Might be worth adding a summary of changes in the main spec document
> as new versions are released.
>
> Herbert
>
>
> On Tue, May 16, 2017 at 12:55 PM, Frank T. Bergmann
> <fbe...@ca...> wrote:
>> Hello Herbert
>>
>> Version 3 extends the SED-ML language to include addressing of
>> external data files, by introducing the datasource construct ... the
>> summary is here:
>>
>> https://github.com/fbergmann/sedml-data-proposal
>>
>> cheers
>> Frank
>>
>> On Tue, May 16, 2017 at 9:48 PM, Herbert Sauro <uw....@gm...> wrote:
>>> I just noticed that JWS Online uses Level 1 Version 3 of SED-ML.
>>>
>>> What's the difference between Version 2 and 3? I couldn't find a
>>> summary of the differences in the draft document for Version 3.
>>>
>>> Herbert
>>>
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David Nickerson
about.me/david.nickerson