Re: [scipion-users] xmipp3 - filter volumes

[Grigory S. <sha...@gm...>]

Dear Claudio,

stk is the SPIDER format (along with spi, vol etc.). If you want to use
Chimera, you could rename stk to vol, then it will recognize it. Otherwise,
Scipion has several built-in viewers that can display volumes.

Best regards,
Grigory

--------------------------------------------------------------------------------
Grigory Sharov, Ph.D.

MRC Laboratory of Molecular Biology,
Francis Crick Avenue,
Cambridge Biomedical Campus,
Cambridge CB2 0QH, UK.
tel. +44 (0) 1223 267228 <+44%201223%20267228>
e-mail: gs...@mr...


On Fri, Jan 5, 2024 at 11:15 PM Grosman, Claudio <gr...@il...>
wrote:

> Dear Scipion team members,
>
> I am trying to filter a map using the xmipp3 - filter volumes protocol.
> Among the output files I see an stk file, but *I do not see an mrc file
> that could be opened with, say ChimeraX*.
>
> Is the protocol meant o work like this? Is only an stk file generated as a
> result?
>
> Muchas gracias, por adelantado!
>
>
>
> Claudio
>
>
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