[scipion-users] scipion 3.3 - xmipp 3.23.11.0 - No module named 'xmipp.constants'; 'xmipp' is not a package

[Lugmayr, W. <w.l...@uk...>]

hi,

i made an new fresh installation of scipion 3.3 (incl. new miniconda) with only stable tomo plugins and got the following error:
 >>> WARNING: Image library not found!
  > Please install Xmipp to get full functionality. 
(Configuration->Plugins->scipion-em-xmipp -> expand, in Scipion plugin manager window)

the plugin manager thinks its installed:
scipion-em-xmipp               23.11.0.0  [X]
scipion-em-xmipp2                         [ ]
scipion-em-xmipptomo           3.23.11.0  [X]

and with inspect i get:
$ scipion3 inspect xmipp
Scipion v3.3.0 - Eugenius

 >>> WARNING: 'import xmipp' is deprecated for the xmipp binding.
Plugin: xmipp
   >>> constants:  error -> Traceback (most recent call last):
  File "/gpfs/cssb/software/centos7/x86_64/scipion/3.x-tomo/miniconda/envs/scipion3/lib/python3.8/site-packages/scipion/install/inspect_plugins.py", line 74, in getSubmodule
    m = importlib.import_module('%s.%s' % (name, subname))
  File "/gpfs/cssb/software/centos7/x86_64/scipion/3.x-tomo/miniconda/envs/scipion3/lib/python3.8/importlib/__init__.py", line 127, in import_module
    return _bootstrap._gcd_import(name[level:], package, level)
  File "<frozen importlib._bootstrap>", line 1014, in _gcd_import
  File "<frozen importlib._bootstrap>", line 991, in _find_and_load
  File "<frozen importlib._bootstrap>", line 970, in _find_and_load_unlocked
ModuleNotFoundError: No module named 'xmipp.constants'; 'xmipp' is not a package
:

do i need a development version of the core packages?
$ scipion3 update
Scipion v3.3.0 - Eugenius
The package scipion-pyworkflow is up to date.  Your version is 3.3.1
The package scipion-em is up to date.  Your version is 3.4.0
The package scipion-app is up to date.  Your version is 3.3.0
Scipion is up to date.

cheers,
wolfgang

p.s.
the last lines of the xmipp install:
:
Compiling xmippViz----------------------------------------
 Done. Visit compileLOG.txt for details                                                                      

  * Xmipp has been successfully compiled * 
    > > > Don't forget to install! < < <   


CC variable found in the environment with this value: /gpfs/cssb/software/spack/opt/spack/linux-centos7-x86_64/gcc-4.8.5/gcc-11.3.0-2jqkvfzltuxvi4y5v6j35ie2qosqhjdk/bin/gcc.
CXX variable found in the environment with this value: /gpfs/cssb/software/spack/opt/spack/linux-centos7-x86_64/gcc-4.8.5/gcc-11.3.0-2jqkvfzltuxvi4y5v6j35ie2qosqhjdk/bin/g++.

Installing -----------------------------------------------
 Xmipp installed on /gpfs/cssb/software/centos7/x86_64/scipion/3.x-tomo/software/em/xmippSrc-v3.23.11.0/build

Linking to Scipion ---------------------------------------
 Xmipp linked to Scipion on /gpfs/cssb/software/centos7/x86_64/scipion/3.x-tomo/software/em/xmipp                                                                                                                                                      
************************************************************
*                                                          *
*  Xmipp Nereus has been successfully installed, enjoy it! *
*                                                          *
************************************************************



-- 
Universitätsklinikum Hamburg-Eppendorf (UKE)
@ Centre for Structral Systems Biology (CSSB)
@ Deutsches Elektronen-Synchrotron (DESY)
Notkestrasse 85 Gebäude 15
22607 Hamburg, Germany
Tel.: +49 40 8998-87652
Email: wol...@cs...
http://www.cssb-hamburg.de/