Re: [scipion-users] python pkg error

[Pablo C. <pc...@cn...>]

This should be fixed now in fresh new installations.

On 3/8/22 8:50, Pablo Conesa wrote:
>
> Hi Cristopher, all. Yes that is a consequence of a nasty third party 
> updates that are causing this conflict. We will fix this asap (we are 
> on it)
>
>
> I think this may work. Before installing xmipp run this:
>
> scipion3 run pip install scipy==1.8.1
>
>
> On 2/8/22 18:41, Christopher Borsa wrote:
>> I am attempting to run Scipion3 on a Centos7 workstation. Scipion3 
>> installs cleanly, but upon installing xmipp I get the following error:
>>
>> pkg_resources.ContextualVersionConflict: (numpy 1.23.1 
>> (/home/scipion_user/.conda/envs/scipion3/lib/python3.8/site-packages), 
>> Requirement.parse('numpy<=1.18.4'), {'scipion-pyworkflow'})
>> Error at main: (numpy 1.23.1 
>> (/home/scipion_user/.conda/envs/scipion3/lib/python3.8/site-packages), 
>> Requirement.parse('numpy<=1.18.4'), {'scipion-pyworkflow'})
>>
>> I have tried uninstalling/reinstalling numpy, scipy, and 
>> scipion-pyworkflow, but pip cannot find a dependency solution. (I can 
>> successfully install xmipp2 from the Scipion3 GUI)
>>
>> How should I go about trying to troubleshoot this?
>>
>> Kind regards,
>>
>> Christopher
>>
>>
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> -- 
> Pablo Conesa - *Madrid Scipion <http://scipion.i2pc.es> team*
>
>
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-- 
Pablo Conesa - *Madrid Scipion <http://scipion.i2pc.es> team*