Re: [scipion-users] Question about scipion3 relion test failure

[HONG Z. <hz...@wi...>]

Hi Grigory,

SUper thanks! It works!

Bien cordialement,

Hong
________________________________
From: Grigory Sharov <sha...@gm...>
Sent: Tuesday, July 12, 2022 10:37 AM
To: Mailing list for Scipion users <sci...@li...>
Cc: HONG ZHAN <hz...@wi...>
Subject: Re: [scipion-users] Question about scipion3 relion test failure

Dear Hong,

There's no test with such a name. You can get the list of tests by running:

scipion3 test --grep relion


Best regards,
Grigory

--------------------------------------------------------------------------------
Grigory Sharov, Ph.D.

MRC Laboratory of Molecular Biology,
Francis Crick Avenue,
Cambridge Biomedical Campus,
Cambridge CB2 0QH, UK.
tel. +44 (0) 1223 267228<tel:+44%201223%20267228>
e-mail: gs...@mr...<mailto:gs...@mr...>


On Tue, Jul 12, 2022 at 4:30 PM HONG ZHAN via scipion-users <sci...@li...<mailto:sci...@li...>> wrote:
Dear Scipion group,

My name is Hong Zhan and research scientist at the University of Wisconsin-Madison. I am recently trying out Scipion-tomo package on my CryoET project. I am very interested in the workflow and particularly am interested in pyseg.

Os: Ubuntu 20.0.4; scipion-em updated version.

I installed the scipion3 and along with plugins. However, it seems my relion related tests failed. But Cistem and others are fine. Would be great to have some help on the issues. I have relion3 and relion4 enabled. But it seems not find the relion test file, would be name changed?
Super thanks!
Hong
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