Re: [scipion-users] export particles and metadata

[C.J. <bi...@gm...>]

Hi,

I have some issue (see the attached picture) while exporting particles. Did
I miss something when installing SCIPION?

Thanks!
Jianhao

Serban Ilca <SI...@ny...> 于2022年5月27日周五 12:14写道：

> Hi Jianhao,
>
> As Grigory pointed out, you can indeed run 'relion - export particles' on
> the output of 'localrec - extract subparticles' to accomplish what you want.
>
> Cheers,
> Serban
> ------------------------------
> *From:* C.J. <bi...@gm...>
> *Sent:* 27 May 2022 13:18
> *To:* Mailing list for Scipion users <sci...@li...>
> *Subject:* Re: [scipion-users] export particles and metadata
>
> Hi, these particles are re-extracted by localrec. Soooo, i don't think
> relion can do that.
>
> Jianhao
>
> Grigory Sharov <sha...@gm...> 于2022年5月27日周五 02:26写道：
>
> Hi,
>
> I don't know about localrec plugin but relion plugin has an export
> particle protocol that does exactly that.
>
> Best regards,
> Grigory
>
>
> --------------------------------------------------------------------------------
> Grigory Sharov, Ph.D.
>
> MRC Laboratory of Molecular Biology,
> Francis Crick Avenue,
> Cambridge Biomedical Campus,
> Cambridge CB2 0QH, UK.
> tel. +44 (0) 1223 267228 <+44%201223%20267228>
> e-mail: gs...@mr...
>
>
> On Fri, May 27, 2022 at 12:32 AM C.J. <bi...@gm...> wrote:
>
> Hi,
>
> I run localrec in SCIPION v3.0.9 to extract subparticles. But how can I
> export both particles and metadata into relion3 star file and particles?
>
> Thank you!
> Jianhao
> _______________________________________________
> scipion-users mailing list
> sci...@li...
> https://lists.sourceforge.net/lists/listinfo/scipion-users
>
> _______________________________________________
> scipion-users mailing list
> sci...@li...
> https://lists.sourceforge.net/lists/listinfo/scipion-users
>
> _______________________________________________
> scipion-users mailing list
> sci...@li...
> https://lists.sourceforge.net/lists/listinfo/scipion-users
>