Re: [scipion-users] export particles and metadata

[Serban I. <SI...@ny...>]

Hi Jianhao,

As Grigory pointed out, you can indeed run 'relion - export particles' on the output of 'localrec - extract subparticles' to accomplish what you want.

Cheers,
Serban
________________________________
From: C.J. <bi...@gm...>
Sent: 27 May 2022 13:18
To: Mailing list for Scipion users <sci...@li...>
Subject: Re: [scipion-users] export particles and metadata

Hi, these particles are re-extracted by localrec. Soooo, i don't think relion can do that.

Jianhao

Grigory Sharov <sha...@gm...<mailto:sha...@gm...>> 于2022年5月27日周五 02:26写道：
Hi,

I don't know about localrec plugin but relion plugin has an export particle protocol that does exactly that.

Best regards,
Grigory

--------------------------------------------------------------------------------
Grigory Sharov, Ph.D.

MRC Laboratory of Molecular Biology,
Francis Crick Avenue,
Cambridge Biomedical Campus,
Cambridge CB2 0QH, UK.
tel. +44 (0) 1223 267228<tel:+44%201223%20267228>
e-mail: gs...@mr...<mailto:gs...@mr...>


On Fri, May 27, 2022 at 12:32 AM C.J. <bi...@gm...<mailto:bi...@gm...>> wrote:
Hi,

I run localrec in SCIPION v3.0.9 to extract subparticles. But how can I export both particles and metadata into relion3 star file and particles?

Thank you!
Jianhao
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