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Re: [scipion-users] Scipion version for latest motioncor2
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From: Pablo C. <pc...@cn...> - 2022-04-27 16:31:02
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3.0.16 of scipion-em is out. regular scipion3 update should bring it. There is a cache mechanism, so it may not be detected until tomorrow. If you want to force it, remove the cached files: rm /tmp/outdated_cache_scipion-em CHANGES in this release are: V3.0.16 users: - Fixing an error calculating the FSC resolution value. - FSC plots legend shows "resolution" ;-) - Align movies protocols: possible outputs for even odd mics defined - Import volume: fix downloading some old EMD id not numeric - Hdf files can be open from the file browser - Adding the protocol "box size related parameters" to estimate the different parameters needed for various pickers. developers: - New method at pwem/convert/headers.setMRCSamplingRate: sets the sampling rate of an mrc file. Image Object has it: volume.setMRCSamplingRate(3.5) should work. - protocols.conf minimized only containing its own protocols All the best, Pablo On 27/4/22 8:42, Pablo Conesa wrote: > > Sure, I'll review what is in devel and make a release, hopefully today. > > On 26/4/22 19:17, Grigory Sharov wrote: >> Dear Matt, >> >> you are right, the latest motioncor2 plugin requires a new release of >> scipion-em (3.0.16) with required changes done on 19 March >> >> Pablo, could you make a release? >> >> Best regards, >> Grigory >> >> -------------------------------------------------------------------------------- >> Grigory Sharov, Ph.D. >> >> MRC Laboratory of Molecular Biology, >> Francis Crick Avenue, >> Cambridge Biomedical Campus, >> Cambridge CB2 0QH, UK. >> tel. +44 (0) 1223 267228 <tel:+44%201223%20267228> >> e-mail: gs...@mr... >> >> >> On Tue, Apr 26, 2022 at 5:53 PM Matt Harrington via scipion-users >> <sci...@li...> wrote: >> >> On Tue, Apr 26, 2022 at 8:19 AM Matt Harrington >> <ma...@ms...> wrote: >> >> > It would make the SBGrid team's job easier if the working >> > version were tagged, perhaps as 3.0.11. Could the Scipion team do >> > that for us? >> >> 3.0.11 would not be the correct tag. I thought 3.0.10 was the >> latest, >> so I suggested 3.0.11, but I was only looking at scipion-app. >> >> I see 3.0.19 in scipion-pyworkflow. Does that version contain the >> fixes for the latest version of motioncor2? If not, could the team >> release 3.0.20 with those fixes? >> >> Matt >> >> >> _______________________________________________ >> scipion-users mailing list >> sci...@li... >> https://lists.sourceforge.net/lists/listinfo/scipion-users >> >> >> >> _______________________________________________ >> scipion-users mailing list >> sci...@li... >> https://lists.sourceforge.net/lists/listinfo/scipion-users > -- > Pablo Conesa - *Madrid Scipion <http://scipion.i2pc.es> team* > > > _______________________________________________ > scipion-users mailing list > sci...@li... > https://lists.sourceforge.net/lists/listinfo/scipion-users -- Pablo Conesa - *Madrid Scipion <http://scipion.i2pc.es> team* |
