Re: [scipion-users] scipion-em-phenix 3.1.6 warning/error?

[Grigory S. <sha...@gm...>]

Hi,

I believe this has been finally fixed in devel branch:
https://github.com/scipion-em/scipion-em-phenix/issues/51

Best regards,
Grigory

--------------------------------------------------------------------------------
Grigory Sharov, Ph.D.

MRC Laboratory of Molecular Biology,
Francis Crick Avenue,
Cambridge Biomedical Campus,
Cambridge CB2 0QH, UK.
tel. +44 (0) 1223 267228 <+44%201223%20267228>
e-mail: gs...@mr...


On Fri, Oct 1, 2021 at 11:20 AM Lugmayr, Wolfgang <w.l...@uk...> wrote:

> Hi,
>
> I updated the plugin above today and when I open an existing project I get
> the following error:
>
> $ scipion3 last
> Scipion v3.0.9 - Eugenius
> Failed to read settings. The reported error was:
>   While reading from
> '/beegfs/cssb/software/em/scipion/3.0/anaconda3/envs/.scipion3env/lib/python3.8/site-packages/phenix/protocols.conf'
> [line  4]: option '{"tag"' in section 'PROTOCOLS' already exists
> To solve it, fix
> /beegfs/cssb/software/em/scipion/3.0/anaconda3/envs/.scipion3env/lib/python3.8/site-packages/phenix/protocols.conf
> and run again.
>
> Its not really clear how and what I should fix ;-)
> Can you please give me a hint?
>
> Cheers,
> Wolfgang
>
> --
> Universitätsklinikum Hamburg-Eppendorf (UKE)
> @ Centre for Structral Systems Biology (CSSB)
> @ Deutsches Elektronen-Synchrotron (DESY)
> Notkestrasse 85 Gebäude 15
> 22607 Hamburg, Germany
> Tel.: +49 40 8998-87652
> Email: wol...@cs...
> http://www.cssb-hamburg.de/
>
>
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