Re: [scipion-users] Updating relion plugin

[Grigory S. <sha...@gm...>]

I found my mistake.

The following will fix it (wait a few minutes, the release is building on
pypi now):

*scipion installp -p scipion-em-relion 4.0b2 --noBin*

Thank you for reporting it, Dmitry!

Best regards,
Grigory

--------------------------------------------------------------------------------
Grigory Sharov, Ph.D.

MRC Laboratory of Molecular Biology,
Francis Crick Avenue,
Cambridge Biomedical Campus,
Cambridge CB2 0QH, UK.
tel. +44 (0) 1223 267228 <+44%201223%20267228>
e-mail: gs...@mr...


On Mon, Sep 27, 2021 at 10:30 AM Dmitry Semchonok <Sem...@gm...>
wrote:

>  I removed the relion plugin completely and then install as it was in the
> email —  *scipion installp -p scipion-em-relion 4.0b1 --noBin. *(in my
> case scipion3 installp -p scipion-em-relion 4.0b1 --noBin) --- the result
> is the same [image: :slightly_smiling_face:]
>
>
> Sincerely,
>
> Dmitry
>
>
> On 27. Sep 2021, at 11:25, Grigory Sharov <sha...@gm...>
> wrote:
>
> Hi Dmitry,
>
> Have you tried to update scipion (scipion update?)?
> I don't use plugin manager much, so I suggest running plugin update via
> cmdline as in the email.
>
> Best regards,
> Grigory
>
>
> --------------------------------------------------------------------------------
> Grigory Sharov, Ph.D.
>
> MRC Laboratory of Molecular Biology,
> Francis Crick Avenue,
> Cambridge Biomedical Campus,
> Cambridge CB2 0QH, UK.
> tel. +44 (0) 1223 267228 <+44%201223%20267228>
> e-mail: gs...@mr...
>
>
> On Mon, Sep 27, 2021 at 10:16 AM Dmitry Semchonok <Sem...@gm...>
> wrote:
>
>> Dear Grigory & colleagues,
>>
>> After update the relion plugin via plugin manager the relion disappeared
>> from the list of the plugins instead I have the following error
>>
>>
>>
>> Scipion v3.0.9 - Eugenius
>>  > error when importing from relion.protocols: No module named
>> 'relion.protocols._legacy'
>>    File
>> "/home/user/Data/Software/miniconda/envs/scipion3/lib/python3.8/site-packages/relion/protocols/__init__.py",
>> line 61, in <module>
>>    Check the plugin manager (Configuration->Plugins in Scipion manager
>> window)
>>    or use 'scipion installp --help --checkUpdates' in the command line to
>> check for upgrades,
>>    it could be a versions compatibility issue.
>>
>>
>>
>>
>> Any solution?
>>
>> Thank you
>>
>> Sincerely,
>> Dmitry
>>
>>
>>
>>
>>
>>
>>
>> _______________________________________________
> scipion-users mailing list
> sci...@li...
> https://lists.sourceforge.net/lists/listinfo/scipion-users
>
>
> _______________________________________________
> scipion-users mailing list
> sci...@li...
> https://lists.sourceforge.net/lists/listinfo/scipion-users
>