Re: [scipion-users] Problem with scipion installation

[Jorge <jji...@cn...>]

Hi Xiaogen,

There's a -p missing in your command. The correct one is:

scipion3 installp -p scipion-em-xmipp, but if you've installed scipion3 
without xmipp, which is more than a plugin. The independent installation 
of xmipp requires some extra steps. You can check the instructions here 
--> https://github.com/I2PC/xmipp. Apart from that, I observe in the log 
attached that the cuda is not recognized (check if it's in environment 
variable LD_LIBRARY_PATH, this is the value I have --> 
/usr/local/cuda/lib64). And its also compaining about the MPI, but let's 
go step by step. First of all, try to follow the installation 
instructions and see how it goes, and check alse the LD_LIBRARY_PATH 
value. If the problem remains, please let us know.

Best,

Scipion Team

On 6/24/21 9:19 AM, Xiaogen Zhou wrote:
> Hello,
>
> When I try to install scipion with conda in the Linux system, it 
> always fails. See the attached screenshot. However, it will successful 
> if I use "-noXimpp".  After installing Scipion, I use "
> scipion3 installp scipion-em-xmipp -j 4" to install Ximpp. The system 
> indicates "unrecognized arguments: scipion-em-xmipp".
> I have tried many times, but it always fails. I will appreciate it  if 
> you can help me deal with this.
>
> Thanks,
> Xiaogen
>
>
>
>
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