[scipion-users] Antw: Re: SCIPION installation error -- xmipp: Something went wrong (SEE ERRORS ABOVE) when running:

[Christian T. <chr...@bi...>]

Hi all, 

Dmitrys collegue here.

yes we have the library in the scipion3 env:


[user@dataanalysisserver1 lib]$ ls -d $PWD/libwebp.so.7                                                                                                           
/home/user/Data/Software/miniconda/envs/scipion3/lib/libwebp.so.7 

What's puzzles me a bit, is this in the error log:

[92m conda activate scipion3 ; conda install fftw -y -c defaults[0m
CommandNotFoundError: Your shell has not been properly configured to use 'conda activate'.

When I am coping this command, it runs without any issue. 


Thanks for your help.

best
Christian



>>> Grigory Sharov <sha...@gm...> 20.05.21 16.39 Uhr >>>
Hi,

do you have libwebp.so.7 in
/home/user/Data/Software/miniconda/envs/scipion3/lib/ ?

Best regards,
Grigory

--------------------------------------------------------------------------------
Grigory Sharov, Ph.D.

MRC Laboratory of Molecular Biology,
Francis Crick Avenue,
Cambridge Biomedical Campus,
Cambridge CB2 0QH, UK.
tel. +44 (0) 1223 267228 <+44%201223%20267228>
e-mail: gs...@mr...


On Thu, May 20, 2021 at 3:00 PM Dmitry Semchonok <Sem...@gm...>
wrote:

> Dear colleagues,
>
> We reinstalled the centos 7 on our server as well as miniconda.
>
>
>
> The core was installed correctly but during xmipp installation some error
> appeared. Please have a look on the file attached.
>
>
>
> Could you please advice how to proceed?
>
>
>
>
>
>
> Thank you in  advance.
>
>
> Sincerely,
> Dmitry and Christian_______________________________________________
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