Re: [scipion-users] make externally compiled HDF5 available for xmipp compile

[Pablo C. <pc...@cn...>]

Thanks Jason.

There is a detailed "custom xmipp installation" page 
<https://github.com/I2PC/xmipp/wiki/Xmipp-configuration-(version-20.07)> 
where you can adapt xmipp to your system, providing default installation 
does not work.


On 19/2/21 1:13, Jason Key wrote:
> Hi David,
>
> On Thu, Feb 18, 2021 at 12:42 PM Hoover, David (NIH/CIT) [E] via
> scipion-users <sci...@li...> wrote:
>> Is there any way of making HDF5 headers and libraries available for compiling xmipp?
>> That is, must I install HDF5 with yum or apt-get into /usr/lib and /usr/include, or is there an environment variable or configuration setting that can be set to force the compile to look elsewhere for the header and library files?
> I was able to do this by adding INCDIRFLAGS and LIBDIRFLAGS variables
> to the xmipp.conf file in "software/em/xmippSrc-v3.20.07".
>
> Best,
> Jason
>
-- 
Pablo Conesa - *Madrid Scipion <http://scipion.i2pc.es> team*