Re: [scipion-users] cryoSPARC inside SCIPION

[Grigory S. <sha...@gm...>]

Hi Dmitry,

The opening project slowdown is fixed in the latest plugin release. In my
experience this saved 50% of time to open/load a project with many
cryosparc protocols inside. Let us know if you still experience the
performance issues.

Best regards,
Grigory

--------------------------------------------------------------------------------
Grigory Sharov, Ph.D.

MRC Laboratory of Molecular Biology,
Francis Crick Avenue,
Cambridge Biomedical Campus,
Cambridge CB2 0QH, UK.
tel. +44 (0) 1223 267228 <+44%201223%20267228>
e-mail: gs...@mr...


On Sun, Dec 27, 2020 at 2:41 PM <pc...@cn...> wrote:

> We recently saw cryosparc not responding to our request. We weren't
> defining a timeout so the consequence is that, a project never opens and
> freezes.
>
> A restart of cryosparc fixed it. Additionally we are working, if not
> released yet (Yunior should know), on a tolerance fix to avoid the freeze
> even if cs does not respond.
>
> El 27 dic. 2020 11:56, Grigory Sharov <sha...@gm...> escribió:
>
> Hi Dmitry,
>
> So you have a project with few cryosparc protocols and nothing running
> there.
> Do you mean that the project window takes a lot of time to open? What's
> the total number of protocols? Could you maybe share the whole project
> workflow (export it to json) privately?
>
> We did start working on profiling scipion performance so this will be a
> useful case
>
> Thanks,
> Grigory
>
>
> On Tue, Dec 22, 2020, 09:20 Dmitry Semchonok <Sem...@gm...> wrote:
>
> Dear colleagues,
>
> We have a slowing down of any of our projects that contains any of
> cryoSPARC protocol inside the SCIPION even when no active process is
> running.
> (I do not mean the conversion step).
>
>
> At the same time, running the same task separately on the cryoSPARC server
> only does not give any delay in response and finished much faster.
>
>
> Do you perhaps know the reason and the possible fix?
>
>
> Thank you!
>
> Sincerely,
> Dmitry
>
>
>
>
>
>
>
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