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Re: [scipion-users] cryoSPARC inside SCIPION
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From: <pc...@cn...> - 2020-12-27 14:40:43
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<div dir='auto'><div dir="auto">We recently saw cryosparc not responding to our request. We weren't defining a timeout so the consequence is that, a project never opens and freezes.<div dir="auto"><br></div><div dir="auto">A restart of cryosparc fixed it. Additionally we are working, if not released yet (Yunior should know), on a tolerance fix to avoid the freeze even if cs does not respond.</div></div><div><br><div class="elided-text">El 27 dic. 2020 11:56, Grigory Sharov <sha...@gm...> escribió:<br type="attribution"><blockquote style="margin:0 0 0 0.8ex;border-left:1px #ccc solid;padding-left:1ex"><div dir="auto"><div>Hi Dmitry,<div dir="auto"><br></div><div dir="auto">So you have a project with few cryosparc protocols and nothing running there. </div><div dir="auto">Do you mean that the project window takes a lot of time to open? What's the total number of protocols? Could you maybe share the whole project workflow (export it to json) privately? </div><div dir="auto"><br></div><div dir="auto">We did start working on profiling scipion performance so this will be a useful case </div><div dir="auto"><br></div><div dir="auto">Thanks, </div><div dir="auto">Grigory </div><br><br><div class="elided-text"><div dir="ltr">On Tue, Dec 22, 2020, 09:20 Dmitry Semchonok <<a href="mailto:Sem...@gm...">Sem...@gm...</a>> wrote:<br></div><blockquote style="margin:0 0 0 0.8ex;border-left:1px #ccc solid;padding-left:1ex">Dear colleagues,<br> <br> We have a slowing down of any of our projects that contains any of cryoSPARC protocol inside the SCIPION even when no active process is running. <br> (I do not mean the conversion step).<br> <br> <br> At the same time, running the same task separately on the cryoSPARC server only does not give any delay in response and finished much faster.<br> <br> <br> Do you perhaps know the reason and the possible fix?<br> <br> <br> Thank you!<br> <br> Sincerely,<br> Dmitry<br> <br> <br> <br> <br> <br> <br> <br> _______________________________________________<br> scipion-users mailing list<br> <a href="mailto:sci...@li...">sci...@li...</a><br> <a href="https://lists.sourceforge.net/lists/listinfo/scipion-users">https://lists.sourceforge.net/lists/listinfo/scipion-users</a><br> </blockquote></div></div></div> </blockquote></div><br></div></div> |
