Re: [scipion-users] scipion 3.0.3+ does not support multiple queue configurations anymore?

[Pablo C. <pc...@cn...>]

Hi Wolfgang ... we have recently added a new feature that is releated to 
the queue parameters.

With the latest version you can edit the parameters before 
"executing/scheduling" the protocol.

If they are populated (copying a protocol will keep the parameters) the 
user is not asked.

We were currenlty discussing this, and Jose Miguel already suggested to 
ask, at least once to verify de queue parameters and we will do so.

Maybe, with current code (3.0.4), you can remove the queue parameters in 
the template, so users will be asked. (I'm guessing you have queueParams 
poplated in your template)

Does it make sense?





On 5/10/20 11:29, Lugmayr, Wolfgang wrote:
> hi,
>
> we have 2 queues on our cluster, one for cpu jobs and one for gpu jobs.
> so far my template was working fine, but since 3.0.3 and now 3.0.4 scipion always takes the last entry in the QUEUES section of the hosts.conf file.
>
> before a window pop-up appeared after pressing the Execute button and users could choose which queue and which parameters they want to have.
> this defines the nodes the users will get.
>
> now the pop-up window is gone and the job script is generated with the settings of the last queue entry.
> in this case maxwell-gpu.
>
> QUEUES = {
>      "maxwell-cpu": [
>          ["JOB_QUEUE","cssb,all","Queue Name:","Select the target queue/partition"],
>          ["JOB_TIME", "168", "Time (hours)", "Select the time expected (in hours) for this job"],
>          ["JOB_NODES","48","Total cores:","MPI tasks"],
>          ["JOB_CONS","Gold-6126","Constraints:","Call sinfo_detailed on the commandline for the options"]
>      ],
>      "maxwell-gpu": [
>          ["JOB_QUEUE","cssbgpu,allgpu","Queue Name:","Select the target queue/partition"],
>          ["JOB_TIME", "168", "Time (hours)", "Select the time expected (in hours) for this job"],
>          ["JOB_NODES","1","Total cores:","1: Single program call with threads and no MPI"],
>          ["JOB_CONS","GPUx1","Constraints:","Call sinfo_detailed on the commandline for the options"]
>      ]
>      }
>
> is there a new way to do this, so i have to update my template?
>
> cheers,
> wolfgang
>
-- 
Pablo Conesa - *Madrid Scipion <http://scipion.i2pc.es> team*