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Re: [scipion-users] Import particles "error"
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From: Karim R. <kar...@um...> - 2020-07-15 20:27:55
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Dear Jose Miguel, I’m working on our local station. So I’ll need to wait for the release ☺. Cheers, Karim ############################################## Karim Rafie; PhD, AMRSC Olle Engkvist Postdoctoral Research Fellow Carlson Lab Department of Medical Biochemistry and Biophysics Umeå University Umeå, Sweden [associate-member-amrsc-of-the-royal-society-of-chemistry] From: Jose Miguel de la Rosa Trevin <del...@gm...> Sent: 15 July 2020 22:23 To: Mailing list for Scipion users <sci...@li...> Subject: Re: [scipion-users] Import particles "error" Dear Karim, Are you using Scipion in local workstations on the HP2C cluster? I have contacted their stuff to start testing Scipion 3 as soon as possible. Best Regards, Jose Miguel On Wed, Jul 15, 2020 at 9:54 PM Karim Rafie <kar...@um...<mailto:kar...@um...>> wrote: Hi Grigory, Great, thanks for the update. Cheers, Karim ############################################## Karim Rafie; PhD, AMRSC Olle Engkvist Postdoctoral Research Fellow Carlson Lab Department of Medical Biochemistry and Biophysics Umeå University Umeå, Sweden [associate-member-amrsc-of-the-royal-society-of-chemistry] From: Grigory Sharov <sha...@gm...<mailto:sha...@gm...>> Sent: 15 July 2020 21:51 To: Mailing list for Scipion users <sci...@li...<mailto:sci...@li...>> Subject: Re: [scipion-users] Import particles "error" Hi Karim, I'm afraid Scipion 2.0 and relion plugin for it do not support relion 3.1. Scipion 3.0 which will be beta-released soon will have relion 3.1 support. Best regards, Grigory -------------------------------------------------------------------------------- Grigory Sharov, Ph.D. MRC Laboratory of Molecular Biology, Francis Crick Avenue, Cambridge Biomedical Campus, Cambridge CB2 0QH, UK. tel. +44 (0) 1223 267228<tel:+44%201223%20267228> e-mail: gs...@mr...<mailto:gs...@mr...> On Wed, Jul 15, 2020 at 8:07 PM Karim Rafie <kar...@um...<mailto:kar...@um...>> wrote: Hi all, I'm encountering a curious "error" in scipion v2.0. I am trying to import particles from a relion 3.1 star file and whenever I hit execute a window pops up telling me an integer is required. However, it doesn't say where and all fields have a correct integer/float. I reinstalled scipion and now get an error message saying: 'NoneType' object has no attribute 'read' I am guessing it has something to do with the new file format of relion 3.1 star files. Does anyone have a "fix" or an idea what the issue is? Any help is greatly appreciated. Cheers, Karim ############################################## Karim Rafie; PhD, AMRSC Postdoctoral Research Fellow Carlson Lab Department of Medical Biochemistry and Biophysics Umeå University Umeå / Sweden _______________________________________________ scipion-users mailing list sci...@li...<mailto:sci...@li...> https://lists.sourceforge.net/lists/listinfo/scipion-users _______________________________________________ scipion-users mailing list sci...@li...<mailto:sci...@li...> https://lists.sourceforge.net/lists/listinfo/scipion-users |
