Re: [scipion-users] HELICAL RECONSTRUCTION software// symmetry

[Dario Saczko-B. <dar...@go...>]

> We are planning to go back to this and implement now as a proper 
> helical plugin. 
That is great, I am looking forward to that :)

On 23.01.20 15:41, Jose Miguel de la Rosa Trevin wrote:
> Hi Dmitry,
>
> Dario already suggested some of the packages that have helical tools.
> It is also correct that there are not any of these implemented in 
> Scipion right now.
> Together with Juha Huiskone we started to implement the data model for 
> helical processing some time ago.
> We are planning to go back to this and implement now as a proper 
> helical plugin.
>
> Best regards,
> Jose Miguel
>
>
> On Thu, Jan 23, 2020 at 3:36 PM Dario Saczko-Brack via scipion-users 
> <sci...@li... 
> <mailto:sci...@li...>> wrote:
>
>     Hi Dmitry,
>
>     there are some softwares that fokus on helical reconstruction:
>     Spring <http://www.sachse.embl.de/emspring/>, IHRSR
>     <https://bakerlab.ucsd.edu/programs/IHRSR++tutorial_v1.5.pdf>,
>     Relion has also helical processing
>     <https://www3.mrc-lmb.cam.ac.uk/relion//index.php?title=Helical_processing#Particle_extraction>
>     implemented. I am not sure, but so far scipion doesnt have
>     procedures for helical processing included (correct me if I am wrong).
>
>     Best
>
>     Dario
>
>
>
>     On 23.01.20 15:26, Dmitry Semchonok wrote:
>>
>>     Dear colleagues,
>>
>>     Does anyone have recommendations for HELICAL RECONSTRUCTION image
>>     processing software?
>>
>>     Can SCIPION process it in some way?
>>
>>     Another question about the symmetry – how to find the symmetry of
>>     your particle?
>>
>>     Is there a program where you can put your 2D classes and get come
>>     guess for the symmetry?
>>
>>     Sincerely,
>>
>>     Dmitry
>>
>>
>>
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