Re: [scipion-users] HELICAL RECONSTRUCTION software// symmetry

[Jose M. de la R. T. <del...@gm...>]

Hi Dmitry,

Dario already suggested some of the packages that have helical tools.
It is also correct that there are not any of these implemented in Scipion
right now.
Together with Juha Huiskone we started to implement the data model for
helical processing some time ago.
We are planning to go back to this and implement now as a proper helical
plugin.

Best regards,
Jose Miguel


On Thu, Jan 23, 2020 at 3:36 PM Dario Saczko-Brack via scipion-users <
sci...@li...> wrote:

> Hi Dmitry,
>
> there are some softwares that fokus on helical reconstruction: Spring
> <http://www.sachse.embl.de/emspring/>, IHRSR
> <https://bakerlab.ucsd.edu/programs/IHRSR++tutorial_v1.5.pdf>, Relion has
> also helical processing
> <https://www3.mrc-lmb.cam.ac.uk/relion//index.php?title=Helical_processing#Particle_extraction>
> implemented. I am not sure, but so far scipion doesnt have procedures for
> helical processing included (correct me if I am wrong).
>
> Best
>
> Dario
>
>
>
> On 23.01.20 15:26, Dmitry Semchonok wrote:
>
> Dear colleagues,
>
>
>
> Does anyone have recommendations for HELICAL RECONSTRUCTION image
> processing software?
>
>  Can SCIPION process it in some way?
>
>
>
>
>
> Another question about the symmetry – how to find the symmetry of your
> particle?
>
> Is there a program where you can put your 2D classes and get come guess
> for the symmetry?
>
>
>
> Sincerely,
>
> Dmitry
>
>
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