Re: [scipion-users] Scipion and sqlite database or disk full error

[Juha H. <juh...@he...>]

So no temporary files whatsoever? Nothing like the ones explained here? -->
https://www.sqlite.org/tempfiles.html

On Fri, Nov 1, 2019 at 1:50 PM Jose Miguel de la Rosa Trevin <
del...@gm...> wrote:

> Hi,
>
> All sqlite databases are written inside the project folder. Some are
> run.db inside each run folder.
> Others are the .sqlite files for output sets.
>
> Best,
> Jose Miguel
>
>
>
> On Fri, Nov 1, 2019 at 12:33 PM Juha Huiskonen <juh...@he...>
> wrote:
>
>> Hi Jose Miquel,
>>
>> We need to investigate and it would be good to know where the file is
>> written? Is it only the one written in the project directory (we do have
>> plenty of space there)?  Or are there temporary files written somewhere
>> else? (If yes where? /tmp? ~/?)
>>
>> Best wishes,
>> Juha
>>
>>
>> On Fri, Nov 1, 2019 at 1:12 PM Jose Miguel de la Rosa Trevin <
>> del...@gm...> wrote:
>>
>>> Hi Juha,
>>>
>>> Many temporary SQL database are kept in memory and final output written
>>> to disk.
>>> Have you check quota errors or if there is space left on disk?
>>>
>>> Best,
>>> Jose Miguel
>>>
>>>
>>>
>>> On Fri, Nov 1, 2019 at 11:47 AM Juha Huiskonen <
>>> juh...@he...> wrote:
>>>
>>>> Dear All,
>>>>
>>>> We are seeing this error with large datasets (over 1M particles).
>>>> Where is Scipion writing temporary sql files? I suspect there might be a
>>>> limit in the file system, causing this error.   Or can it be because of
>>>> something else? Have others experienced this error and solved it?
>>>>
>>>> Best wishes,
>>>> Juha
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