Re: [scipion-users] Scipion and sqlite database or disk full error

[Jose M. de la R. T. <del...@gm...>]

Hi,

All sqlite databases are written inside the project folder. Some are run.db
inside each run folder.
Others are the .sqlite files for output sets.

Best,
Jose Miguel



On Fri, Nov 1, 2019 at 12:33 PM Juha Huiskonen <juh...@he...>
wrote:

> Hi Jose Miquel,
>
> We need to investigate and it would be good to know where the file is
> written? Is it only the one written in the project directory (we do have
> plenty of space there)?  Or are there temporary files written somewhere
> else? (If yes where? /tmp? ~/?)
>
> Best wishes,
> Juha
>
>
> On Fri, Nov 1, 2019 at 1:12 PM Jose Miguel de la Rosa Trevin <
> del...@gm...> wrote:
>
>> Hi Juha,
>>
>> Many temporary SQL database are kept in memory and final output written
>> to disk.
>> Have you check quota errors or if there is space left on disk?
>>
>> Best,
>> Jose Miguel
>>
>>
>>
>> On Fri, Nov 1, 2019 at 11:47 AM Juha Huiskonen <
>> juh...@he...> wrote:
>>
>>> Dear All,
>>>
>>> We are seeing this error with large datasets (over 1M particles).  Where
>>> is Scipion writing temporary sql files? I suspect there might be a limit in
>>> the file system, causing this error.   Or can it be because of something
>>> else? Have others experienced this error and solved it?
>>>
>>> Best wishes,
>>> Juha
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