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Re: [scipion-users] Small question
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From: Pablo C. <pc...@cn...> - 2019-10-02 12:10:55
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Hi Dimitry, it is clear now what are you referring to...thanks.... Personally I wasn't aware of them. I guess you are referring to this: http://pdb101.rcsb.org/learn/guide-to-understanding-pdb-data/biological-assemblies#Anchor-BioUnit I guess that meanwhile we decide to include this.....There is a way to ask Chimera to do it and then import it in Scipion? On 2/10/19 12:11, Dmitry Semchonok wrote: > Dear Marta, > > This the protocol in SCIPION 2 --> 3D -->Initial Volume --> xmipp3 – convert a PDB > > > Inside this protocol there are the following options – Retrieve PDB from id; object; file > > So what would be useful if we can have one more button as it in Chimera saying id biounit – and it is loading not a single/part of the molecule but the full biological unit > > Thank you! > > Sincerely, > Dmitry > > > > On 02.10.19, 09:18, "Marta Martinez" <mm...@cn...> wrote: > > > Hi Dmitry, > please, what Scipion protocol are you talking about? > Regards: MARTA > > > > > Dear colleagues, > > > > Small question > > When we import the PDB (in the initial volume tab) it is good to have > PDB assembly option or as it in chimera – PDB biounit. > > Is that possible? > > > > Sincerely, > > Dmitry > > > > -- > Marta Martinez Gonzalez > > Biocomputing Unit (Lab B13) > National Center for Biotechnology-CSIC > Darwin, 3. Campus de la Universidad Autonoma de Madrid > 28049 Madrid. Spain > Tel:+34 915854510 Fax:+34 913720112 > E-mail: mm...@cn... > > > > _______________________________________________ > scipion-users mailing list > sci...@li... > https://lists.sourceforge.net/lists/listinfo/scipion-users > > > > > > _______________________________________________ > scipion-users mailing list > sci...@li... > https://lists.sourceforge.net/lists/listinfo/scipion-users -- Pablo Conesa - *Madrid Scipion <http://scipion.i2pc.es> team* |
