Re: [scipion-users] Suggestion for Integrating Thunder into Scipion

[Lugmayr, W. <w.l...@uk...>]

hi, 

thunder uses a special licensed nvidia deep learning toolkit. 
this is currently only available though the nvidia development program. 
so each user must sign up and install it by himself unless pre-compiled binaries are provided. 

cheers, 
wolfgang 




From: "范宏成" <187...@16...> 
To: "Mailing list for Scipion users" <sci...@li...>, "scipion" <sc...@cn...> 
Sent: Friday, 12 July, 2019 11:45:56 
Subject: [scipion-users] Suggestion for Integrating Thunder into Scipion 

Hi Developers, 
Have you tried the Thunder single particle program(See this paper [ https://www.nature.com/articles/s41592-018-0223-8) | https://www.nature.com/articles/s41592-018-0223-8) ] ? I find this program can tolerate bad particles and get higher resolution、quality cryo-em map compared to the relion 3.0 using the same particle in my datasets. I hear that the newest version of Thunder will be released next week. Maybe Scipion can integrate this program in plugin? By the way, I also use cryosparc2 . Can Scipion integrat it too? I also sent emails to scipion-userlist. But it gave me response like " Is being held until the list moderator can review it for approval." Is it ok? 

Fan Hongcheng 

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                                范宏成
                            
                    
                        
                            
                                    m18...@16...
                            
                        
                
            
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