Re: [scipion-users] 2Dclasses with millions of particles

[Jose M. de la R. T. <del...@gm...>]

Hi Ipsita,

As Pablo suggested you can try to increase the java memory in the config
file.
Let us know if the problem persists after that change.

Best,
Jose Miguel


On Mon, Jul 8, 2019 at 8:54 AM Pablo Conesa <pc...@cn...> wrote:

> Hi, try to increase java memory setting
> JAVA_MAX_MEMORY = 3
>
> In your <scipion home>/config/scipion.conf
>
> Additionally, try to prune/clean you set as soon as possible.
>
> Xmipp screening particles could be usefull to reject bad ones at the
> begining.
>
>
> El 5 jul. 2019 21:32, Ipsita Banerjee <ips...@bi...>
> escribió:
>
> Dear Scipion Users,
>
> I have a dataset where I have about 2 million picked particles.. I could
> run relion2D classification for these particles..
> However, when I click on the Analyze results button, and try to open the
> tab "Show classification in Scipion", I don't see anything..
> When i click on the tab "show classes only", I can see the classes only..
> Please, I need some help as to what I can do to continue with the
> processing...
>
> Thanks so much...
>
> Best regards,
> Ipsita
>
>
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