Re: [scipion-users] 2Dclasses with millions of particles

[Pablo C. <pc...@cn...>]

<div dir='auto'><div>Hi, try to increase java memory setting&nbsp;</div><div dir="auto"><span style="color: rgb(36, 41, 46); font-family: sfmono-regular, consolas, &quot;liberation mono&quot;, menlo, courier, monospace; font-size: 12px; white-space: pre; background-color: rgb(255, 255, 255);">JAVA_MAX_MEMORY = 3</span><br><div class="gmail_extra" dir="auto"><br></div><div class="gmail_extra" dir="auto">In your &lt;scipion home&gt;/config/scipion.conf</div><div class="gmail_extra" dir="auto"><br></div><div class="gmail_extra" dir="auto">Additionally, try to prune/clean you set as soon as possible.</div><div class="gmail_extra" dir="auto"><br></div><div class="gmail_extra" dir="auto">Xmipp screening particles could be usefull to reject bad ones at the begining.</div><div class="gmail_extra" dir="auto"><br></div><div class="gmail_extra" dir="auto"><br><div class="gmail_quote" dir="auto">El 5 jul. 2019 21:32, Ipsita Banerjee &lt;ips...@bi...&gt; escribió:<br type="attribution"><blockquote class="quote" style="margin:0 0 0 .8ex;border-left:1px #ccc solid;padding-left:1ex">
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<div>Dear Scipion Users, <br>
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I have a dataset where I have about 2 million picked particles.. I could run relion2D classification for these particles..
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However, when I click on the Analyze results button, and try to open the tab "Show classification in Scipion", I don't see anything..
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When i click on the tab "show classes only", I can see the classes only.. <br>
Please, I need some help as to what I can do to continue with the processing... <br>
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Thanks so much... <br>
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Best regards, <br>
Ipsita</div>
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