Re: [scipion-users] Scipion 1.2 not using installed latest versions of em packages

[Pablo C. <pc...@cn...>]

Thanks Andrew! Your


I confirm that --update will not touch already existing values at your 
~/.config/scipion/scipion.conf.


Sometimes, if your config does not have any special setup, like pointing 
to other relion installation (e.g.)...it may worth to:


1.- mv ~/.config/scipion/scipion.conf 
~/.config/scipion/scipion.conf.backup20180629

2.- scipion config


A clean scipion config will point to the latest versions of the em packages.


If you have custom CUDA configurations there for some of the packages 
you will loose them...thus the "backup"


Otherwise follow Andrew's instructions.



On 27/06/18 14:34, Andrew Purkiss wrote:
>
> Hi Teige,
>
>
> You need to run
>
>
> scipion config --compare
>
>
> to check for differences in your config file compared to the template 
> for the scipion version that you are using.
>
>
> scipion config --update
>
>
> should update missing items in the local config, but I don't think it 
> will change the existing package version. For this you need to edit 
> ~/.config/scipion/scipion.conf manually to change the package names.
>
>
> Andy
>
> ------------------------------------------------------------------------
> *From:* Matthews-Palmer, Teige Rowan Seal 
> <t.m...@im...>
> *Sent:* 27 June 2018 13:23:23
> *To:* sci...@li...
> *Subject:* [scipion-users] Scipion 1.2 not using installed latest 
> versions of em packages
> Dear Scipion Users,
>
> I have the following issue with my v1.2 installation:
> I installed only the latest versions of packages like motioncor2 & 
> ctffind4, using scipion install.
> When I try to run their protocols, I get an error message that the 
> binaries for the previous version are missing - it is expecting an 
> older version than the most up-to-date available to install via 
> Scipion’s installer.
> Any ideas why I might be having this problem and how I can get it to 
> use the latest versions?
>
> Thanks a lot,
> Teige
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