Re: [scipion-users] Problems with scipion installation

[Bruno M. <bru...@gm...>]

Hi Gregory,

I just tried that, but didn't work. The same error message keeps appearing.

Traceback (most recent call last):
  File "./scipion", line 34, in <module>
    import subprocess
  File "/usr/lib/python2.7/subprocess.py", line 72, in <module>
    import select
ImportError: No module named select

Best Regards,

Bruno



On Tue, 26 Jun 2018 at 18:48, Gregory Sharov <sha...@gm...>
wrote:

> Hello Bruno,
>
> I might be wrong, but a wild guess:do you have anything sourced like eman2
> which might setting its own PYTHONPATH?
>  Did you try to change first line in the main ./scipion file to point it
> to the python provided with scipion? (software/bin/python)
>
>
> On Tue, Jun 26, 2018, 20:01 Bruno Matsuyama <bru...@gm...>
> wrote:
>
>> I searched on the internet and tried some things, but still not work.
>> What I found is differences between how the modules are called in the
>> script, but I am not sure if I am worsening the situation, because I dont
>> have much experience with ubuntu os.
>>
>> Best Regards,
>>
>> Bruno
>>
>> On Tue, 26 Jun 2018 at 14:56, Patrick Goetz <pg...@ma...>
>> wrote:
>>
>>> The default python on Ubuntu 18.04 seems to still be 2.7:
>>>
>>> cnsit@rossmann:/usr/bin$ cat /etc/lsb-release
>>> DISTRIB_ID=Ubuntu
>>> DISTRIB_RELEASE=18.04
>>> DISTRIB_CODENAME=bionic
>>> DISTRIB_DESCRIPTION="Ubuntu 18.04 LTS"
>>> cnsit@rossmann:/usr/bin$ ls -l python
>>> lrwxrwxrwx 1 root root 9 May  8 12:15 python -> python2.7
>>>
>>>
>>> On 06/25/2018 05:44 PM, Jose Miguel de la Rosa Trevin wrote:
>>> > Hi Bruno,
>>> >
>>> > Maybe Ubuntu 18 comes with Python 3 by default? Although we have
>>> tested
>>> > the install with it.
>>> > Did you search about this error in Ubuntu? Just in case could give us
>>> > some hint.
>>> >
>>> > Best,
>>> > Jose Miguel
>>> >
>>> >
>>> > On Mon, Jun 25, 2018 at 10:04 PM Bruno Matsuyama
>>> > <bru...@gm... <mailto:bru...@gm...>> wrote:
>>> >
>>> >     Hello,
>>> >
>>> >     I'm having some trouble to install scipion  and I hope that
>>> somebody
>>> >     here can help me. I'm using Ubuntu 18.04, and after installing the
>>> >     dependencies, when I tried to generate the configuration files, I
>>> >     get the following message:
>>> >
>>> >       ./scipion config
>>> >
>>> >     Traceback (most recent call last):
>>> >        File "./scipion", line 34, in <module>
>>> >          import subprocess
>>> >        File "/usr/lib/python2.7/subprocess.py", line 72, in <module>
>>> >          import select
>>> >     ImportError: No module named select
>>> >
>>> >     Did someone had the same error or know how to fix it ?
>>> >
>>> >     Best Regards,
>>> >
>>> >     Bruno
>>> >
>>> >
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