[scipion-users] Importing particle coordinates

[Ferreira, J. <j.f...@im...>]

Hi all, 

I have a dataset (4000 images) that I picked using cisTEM. I now want to import the particle coordinates in batch to then extract particles from the micrographs that have been drift-corrected and ctf-estimated in Scipion. I have converted them to the supported format (top left origin 1,1 in pixels). I know that you can import coordinates one image at a time using Xmipp manual picking but this is not feasible for this many micrographs.

Is there a way to import a text file with three columns (image name, x_coordinate, y_coordinate)?

Thanks for the help!

All the best,

Josie