Re: [scipion-users] phase shift data in "analyze results" gui ?

[Carlos O. S. <co...@cn...>]

Dear Jonathan,

phase shift was not calculated in v1.1, it has been added in the 
development branch, and it will be present in next release.

Kind regards, Carlos Oscar


On 13/04/2018 0:59, Jonathan Remis wrote:
>
> Hello,
>
> I am using SCIPION v1.1 and want to use a streaming data pipeline to 
> give me a live readout of phase shifts  as I collect images using 
> gctf.   Unlike most of the other information determined in the CTF 
> estimation I don't see any columns for phase shift. I do see the 
> values in
>
> //Runs/xxx_ProtGctf/extra/micrograph_name/ctfEstimation.txt /
> /
> /
> Perhaps there is a way to extract this data from the file but the 
> format of the file doesn't allow me to grep it, or at least I don't 
> know how to do this.
>
> If I am overlooking something or if you know of a way I could more 
> easily get this information it would be quite useful.
>
>
> Thanks for your help<
> Jonathan
>
>
> -- 
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-- 
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Carlos Oscar Sánchez Sorzano                  e-mail:   co...@cn...
Biocomputing unit                             http://i2pc.es/coss
National Center of Biotechnology (CSIC)
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Campus Universidad Autónoma (Cantoblanco)     Tlf: 34-91-585 4510
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