From: Jonathan R. <jon...@no...> - 2018-04-12 23:00:15
|
Hello, I am using SCIPION v1.1 and want to use a streaming data pipeline to give me a live readout of phase shifts as I collect images using gctf. Unlike most of the other information determined in the CTF estimation I don't see any columns for phase shift. I do see the values in */Runs/xxx_ProtGctf/extra/micrograph_name/ctfEstimation.txt * Perhaps there is a way to extract this data from the file but the format of the file doesn't allow me to grep it, or at least I don't know how to do this. If I am overlooking something or if you know of a way I could more easily get this information it would be quite useful. Thanks for your help< Jonathan -- ------------------------------ *JONATHAN REMIS* CryoEM Facilities Manager Northwestern University Department of Molecular Biosciences mailing address 2205 Tech Drive Hogan 2-100 Evanston, IL 60208-3500 USA *OFFICE* +1-847-491-7813 *EMAIL * jon...@no... <jon...@ab...> |